Increased Yield and High Resilience of Microbiota Representatives With Organic Soil Amendments in Smallholder Farms of Uganda.

Gammaproteobacteria banana fruit microbiome manure mulch organic soil amendments plant-associated microbiota smallholder farms

Journal

Frontiers in plant science
ISSN: 1664-462X
Titre abrégé: Front Plant Sci
Pays: Switzerland
ID NLM: 101568200

Informations de publication

Date de publication:
2021
Historique:
received: 15 11 2021
accepted: 29 12 2021
entrez: 21 2 2022
pubmed: 22 2 2022
medline: 22 2 2022
Statut: epublish

Résumé

Organic matter inputs positively affect soil fertility and quality but management effects on the soil and plant microbiome are less understood. Therefore, we studied the response of microbial colonization of the East African highland banana cultivar "Mpologoma" (AAA genome) under different mulch and manure treatments on three representative smallholder farms in Uganda. In general, the gammaproteobacterial community appeared stable with no significant response to organic matter inputs after 24 months of treatment. Significant differences (

Identifiants

pubmed: 35185962
doi: 10.3389/fpls.2021.815377
pmc: PMC8847376
doi:

Types de publication

Journal Article

Langues

eng

Pagination

815377

Informations de copyright

Copyright © 2022 Köberl, Kusstatscher, Wicaksono, Mpiira, Kalyango, Staver and Berg.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Références

Nat Plants. 2021 Mar;7(3):256-267
pubmed: 33686226
Appl Environ Microbiol. 2012 Jul;78(14):4933-41
pubmed: 22562988
PLoS One. 2013 Apr 22;8(4):e61217
pubmed: 23630581
Front Microbiol. 2015 Feb 11;6:91
pubmed: 25717322
Q Rev Biol. 2012 Dec;87(4):325-41
pubmed: 23397797
Microbiome. 2019 May 15;7(1):74
pubmed: 31092296
Appl Environ Microbiol. 2015 May 15;81(10):3405-18
pubmed: 25769825
Microorganisms. 2020 Mar 13;8(3):
pubmed: 32183118
mBio. 2015 Mar 24;6(2):
pubmed: 25805735
Sci Rep. 2015 Dec 10;5:18078
pubmed: 26657016
Nat Commun. 2018 Nov 20;9(1):4894
pubmed: 30459421
Mol Plant Microbe Interact. 2015 Mar;28(3):212-7
pubmed: 25514681
Nature. 2013 Dec 12;504(7479):195-6
pubmed: 24336262
Microb Ecol. 2012 Feb;63(2):418-28
pubmed: 21947430
Acta Biochim Pol. 2012;59(4):483-8
pubmed: 23240107
J Exp Bot. 2016 Feb;67(4):995-1002
pubmed: 26547794
Hortic Res. 2016 Oct 05;3:16047
pubmed: 27766161
Front Microbiol. 2021 Apr 08;12:650610
pubmed: 33897663
Front Microbiol. 2019 Apr 05;10:616
pubmed: 31024469
Nat Rev Genet. 2014 Dec;15(12):797-813
pubmed: 25266034
New Phytol. 2015 Jun;206(4):1196-206
pubmed: 25655016
Trends Ecol Evol. 2016 Jun;31(6):440-452
pubmed: 26993667
Sci Rep. 2017 Dec 15;7(1):17649
pubmed: 29247170
ISME J. 2012 Oct;6(10):1812-22
pubmed: 22534606
Front Microbiol. 2014 Jun 04;5:148
pubmed: 24926286
Bioinformatics. 2010 Oct 1;26(19):2460-1
pubmed: 20709691
Proc Natl Acad Sci U S A. 2011 Mar 15;108 Suppl 1:4516-22
pubmed: 20534432
Science. 2016 Jun 17;352(6292):1392-3
pubmed: 27313024
ISME J. 2008 Apr;2(4):379-92
pubmed: 18340335
Mol Plant Pathol. 2000 Nov 1;1(6):325-9
pubmed: 20572979
Front Microbiol. 2019 Jul 24;10:1629
pubmed: 31396172
Phytopathology. 2007 Feb;97(2):250-6
pubmed: 18944383
Environ Microbiol. 2006 Feb;8(2):247-57
pubmed: 16423013
Front Plant Sci. 2018 Oct 19;9:1468
pubmed: 30405651
Nat Methods. 2013 Dec;10(12):1200-2
pubmed: 24076764
Genome Biol. 2011 Jun 24;12(6):R60
pubmed: 21702898
Bioinformatics. 2010 Jan 15;26(2):266-7
pubmed: 19914921
ISME J. 2011 Feb;5(2):169-72
pubmed: 20827291
Nat Protoc. 2020 Mar;15(3):799-821
pubmed: 31942082
N Engl J Med. 2011 Nov 10;365(19):1763-70
pubmed: 22029753
Microbiome. 2020 Jun 30;8(1):103
pubmed: 32605663
Microbiome. 2019 Jan 29;7(1):13
pubmed: 30696492
FEMS Microbiol Ecol. 2020 Jul 1;96(7):
pubmed: 32542314
Nat Methods. 2010 May;7(5):335-6
pubmed: 20383131
Sci Rep. 2017 Mar 27;7:45318
pubmed: 28345666
Sci Total Environ. 2020 Jul 20;727:138708
pubmed: 32334231
Nucleic Acids Res. 2017 Jul 3;45(W1):W180-W188
pubmed: 28449106

Auteurs

Martina Köberl (M)

Institute of Environmental Biotechnology, Graz University of Technology, Graz, Austria.

Peter Kusstatscher (P)

Institute of Environmental Biotechnology, Graz University of Technology, Graz, Austria.

Wisnu Adi Wicaksono (WA)

Institute of Environmental Biotechnology, Graz University of Technology, Graz, Austria.

Samuel Mpiira (S)

National Agricultural Research Laboratories, National Agricultural Research Organisation, Kampala, Uganda.

Francis Kalyango (F)

National Agricultural Research Laboratories, National Agricultural Research Organisation, Kampala, Uganda.

Charles Staver (C)

Bioversity International, Montpellier, France.

Gabriele Berg (G)

Institute of Environmental Biotechnology, Graz University of Technology, Graz, Austria.

Classifications MeSH