Increased runs of homozygosity in the autosomal genome of Brazilian individuals with neurodevelopmental delay/intellectual disability and/or multiple congenital anomalies investigated by chromosomal microarray analysis.


Journal

Genetics and molecular biology
ISSN: 1415-4757
Titre abrégé: Genet Mol Biol
Pays: Brazil
ID NLM: 100883590

Informations de publication

Date de publication:
2022
Historique:
received: 04 01 2021
accepted: 30 12 2021
entrez: 3 3 2022
pubmed: 4 3 2022
medline: 4 3 2022
Statut: epublish

Résumé

Runs of homozygosity (ROH) in the human genome may be clinically relevant. The aim of this study was to report the frequency of increased ROH of the autosomal genome in individuals with neurodevelopmental delay/intellectual disability and/or multiple congenital anomalies, and to compare these data with a control group. Data consisted of calls of homozygosity from 265 patients and 289 controls. In total, 7.2% (19/265) of the patients showed multiple ROH exceeding 1% of autosomal genome, compared to 1.4% (4/289) in the control group (p=0.0006). Homozygosity ranged from 1.38% to 22.12% among patients, and from 1.53 to 2.40% in the control group. In turn, 1.9% (5/265) of patients presented ROH ≥10Mb in a single chromosome, compared to 0.3% (1/289) of individuals from the control group (p=0.0801). By excluding cases with reported consanguineous parents (15/24), the frequency of increased ROH was 3.4% (9/250) among patients and 1.7% (5/289) in the control group, considering multiple ROH exceeding 1% of the autosome genome and ROH ≥10Mb in a single chromosome together, although not statistically significant (p=0.1873). These results reinforce the importance of investigating ROH, which with complementary diagnostic tests can improve the diagnostic yield for patients with such conditions.

Identifiants

pubmed: 35238326
pii: S1415-47572022000100107
doi: 10.1590/1678-4685-GMB-2020-0480
pmc: PMC8892458
pii:
doi:

Types de publication

Journal Article

Langues

eng

Pagination

e20200480

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Auteurs

Gabriela Roldão Correia-Costa (GR)

Universidade de Campinas, Faculdade de Ciências Médicas, Departamento de Medicina Translacional, Campinas, SP, Brazil.

Ilária Cristina Sgardioli (IC)

Universidade de Campinas, Faculdade de Ciências Médicas, Departamento de Medicina Translacional, Campinas, SP, Brazil.

Ana Paula Dos Santos (APD)

Universidade de Campinas, Faculdade de Ciências Médicas, Departamento de Medicina Translacional, Campinas, SP, Brazil.

Tânia Kawasaki de Araujo (TK)

Universidade de Campinas, Faculdade de Ciências Médicas, Departamento de Medicina Translacional, Campinas, SP, Brazil.

Rodrigo Secolin (R)

Universidade de Campinas, Faculdade de Ciências Médicas, Departamento de Medicina Translacional, Campinas, SP, Brazil.

Iscia Lopes-Cendes (I)

Universidade de Campinas, Faculdade de Ciências Médicas, Departamento de Medicina Translacional, Campinas, SP, Brazil.

Vera Lúcia Gil-da-Silva-Lopes (VL)

Universidade de Campinas, Faculdade de Ciências Médicas, Departamento de Medicina Translacional, Campinas, SP, Brazil.

Társis Paiva Vieira (TP)

Universidade de Campinas, Faculdade de Ciências Médicas, Departamento de Medicina Translacional, Campinas, SP, Brazil.

Classifications MeSH