Cysteine dependence of Lactobacillus iners is a potential therapeutic target for vaginal microbiota modulation.


Journal

Nature microbiology
ISSN: 2058-5276
Titre abrégé: Nat Microbiol
Pays: England
ID NLM: 101674869

Informations de publication

Date de publication:
03 2022
Historique:
received: 16 06 2021
accepted: 27 01 2022
entrez: 4 3 2022
pubmed: 5 3 2022
medline: 20 4 2022
Statut: ppublish

Résumé

Vaginal microbiota composition affects many facets of reproductive health. Lactobacillus iners-dominated microbial communities are associated with poorer outcomes, including higher risk of bacterial vaginosis (BV), compared with vaginal microbiota rich in L. crispatus. Unfortunately, standard-of-care metronidazole therapy for BV typically results in dominance of L. iners, probably contributing to post-treatment relapse. Here we generate an L. iners isolate collection comprising 34 previously unreported isolates from 14 South African women with and without BV and 4 previously unreported isolates from 3 US women. We also report an associated genome catalogue comprising 1,218 vaginal Lactobacillus isolate genomes and metagenome-assembled genomes from >300 women across 4 continents. We show that, unlike L. crispatus, L. iners growth is dependent on L-cysteine in vitro and we trace this phenotype to the absence of canonical cysteine biosynthesis pathways and a restricted repertoire of cysteine-related transport mechanisms. We further show that cysteine concentrations in cervicovaginal lavage samples correlate with Lactobacillus abundance in vivo and that cystine uptake inhibitors selectively inhibit L. iners growth in vitro. Combining an inhibitor with metronidazole promotes L. crispatus dominance of defined BV-like communities in vitro by suppressing L. iners growth. Our findings enable a better understanding of L. iners biology and suggest candidate treatments to modulate the vaginal microbiota to improve reproductive health for women globally.

Identifiants

pubmed: 35241796
doi: 10.1038/s41564-022-01070-7
pii: 10.1038/s41564-022-01070-7
pmc: PMC10473153
mid: NIHMS1775954
doi:

Substances chimiques

Metronidazole 140QMO216E
Cysteine K848JZ4886

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

434-450

Subventions

Organisme : NIAID NIH HHS
ID : P30 AI060354
Pays : United States
Organisme : NIAID NIH HHS
ID : R01 AI111918
Pays : United States
Organisme : NIAID NIH HHS
ID : T32 AI007387
Pays : United States

Commentaires et corrections

Type : CommentIn

Informations de copyright

© 2022. The Author(s), under exclusive licence to Springer Nature Limited.

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Auteurs

Seth M Bloom (SM)

Ragon Institute of MGH, MIT and Harvard, Cambridge, MA, USA.
Division of Infectious Diseases, Massachusetts General Hospital, Boston, MA, USA.
Harvard Medical School, Boston, MA, USA.

Nomfuneko A Mafunda (NA)

Ragon Institute of MGH, MIT and Harvard, Cambridge, MA, USA.
Harvard T.H. Chan School of Public Health, Boston, MA, USA.

Benjamin M Woolston (BM)

Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA.
Department of Chemical Engineering, Northeastern University, Boston, MA, USA.

Matthew R Hayward (MR)

Ragon Institute of MGH, MIT and Harvard, Cambridge, MA, USA.
Harvard Medical School, Boston, MA, USA.

Josephine F Frempong (JF)

Ragon Institute of MGH, MIT and Harvard, Cambridge, MA, USA.
Medical Scientist Training Program, Washington University School of Medicine, St Louis, MO, USA.

Aaron B Abai (AB)

Harvard College, Harvard University, Cambridge, MA, USA.

Jiawu Xu (J)

Ragon Institute of MGH, MIT and Harvard, Cambridge, MA, USA.

Alissa J Mitchell (AJ)

Department of Obstetrics and Gynecology, Massachusetts General Hospital, Boston, MA, USA.
William Carey University College of Osteopathic Medicine, Hattiesburg, MS, USA.

Xavier Westergaard (X)

Ragon Institute of MGH, MIT and Harvard, Cambridge, MA, USA.
Department of Obstetrics and Gynecology, Massachusetts General Hospital, Boston, MA, USA.
Department of Biological Sciences, Columbia University, New York, NY, USA.

Fatima A Hussain (FA)

Ragon Institute of MGH, MIT and Harvard, Cambridge, MA, USA.
Harvard Medical School, Boston, MA, USA.

Nondumiso Xulu (N)

HIV Pathogenesis Programme (HPP), The Doris Duke Medical Research Institute, University of KwaZulu-Natal, Durban, South Africa.

Mary Dong (M)

Ragon Institute of MGH, MIT and Harvard, Cambridge, MA, USA.
Massachusetts General Hospital, Boston, MA, USA.

Krista L Dong (KL)

Ragon Institute of MGH, MIT and Harvard, Cambridge, MA, USA.
Division of Infectious Diseases, Massachusetts General Hospital, Boston, MA, USA.
Harvard Medical School, Boston, MA, USA.

Thandeka Gumbi (T)

Health Systems Trust, Durban, South Africa.

F Xolisile Ceasar (FX)

Health Systems Trust, Durban, South Africa.

Justin K Rice (JK)

Harvard Medical School, Boston, MA, USA.
Ronald O. Perelman Department of Emergency Medicine, NYU School of Medicine, New York, NY, USA.

Namit Choksi (N)

Department of Obstetrics and Gynecology, Massachusetts General Hospital, Boston, MA, USA.
Rishihood University - School of Healthcare, Sonepat, Haryana, India.

Nasreen Ismail (N)

HIV Pathogenesis Programme (HPP), The Doris Duke Medical Research Institute, University of KwaZulu-Natal, Durban, South Africa.

Thumbi Ndung'u (T)

Ragon Institute of MGH, MIT and Harvard, Cambridge, MA, USA.
HIV Pathogenesis Programme (HPP), The Doris Duke Medical Research Institute, University of KwaZulu-Natal, Durban, South Africa.
Africa Health Research Institute (AHRI), Durban, South Africa.
Max Planck Institute for Infection Biology, Berlin, Germany.
Division of Infection and Immunity, University College London, London, UK.

Musie S Ghebremichael (MS)

Ragon Institute of MGH, MIT and Harvard, Cambridge, MA, USA.
Harvard Medical School, Boston, MA, USA.

David A Relman (DA)

Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA.
Department of Medicine, Stanford University School of Medicine, Stanford, CA, USA.
Infectious Diseases Section, Veterans Affairs Palo Alto Health Care System, Palo Alto, CA, USA.

Emily P Balskus (EP)

Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA.

Caroline M Mitchell (CM)

Ragon Institute of MGH, MIT and Harvard, Cambridge, MA, USA.
Harvard Medical School, Boston, MA, USA.
Department of Obstetrics and Gynecology, Massachusetts General Hospital, Boston, MA, USA.

Douglas S Kwon (DS)

Ragon Institute of MGH, MIT and Harvard, Cambridge, MA, USA. dkwon@mgh.harvard.edu.
Division of Infectious Diseases, Massachusetts General Hospital, Boston, MA, USA. dkwon@mgh.harvard.edu.
Harvard Medical School, Boston, MA, USA. dkwon@mgh.harvard.edu.

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