Journal
NAR cancer
ISSN: 2632-8674
Titre abrégé: NAR Cancer
Pays: England
ID NLM: 101769553
Informations de publication
Date de publication:
Mar 2022
Mar 2022
Historique:
received:
09
11
2021
revised:
03
02
2022
accepted:
16
02
2022
entrez:
7
3
2022
pubmed:
8
3
2022
medline:
8
3
2022
Statut:
epublish
Résumé
Persistent pathogen infection is a known cause of malignancy, although with sparse systematic evaluation across tumor types. We present a comprehensive landscape of 1060 infectious pathogens across 239 whole exomes and 1168 transcriptomes of breast, lung, gallbladder, cervical, colorectal, and head and neck tumors. We identify known cancer-associated pathogens consistent with the literature. In addition, we identify a significant prevalence of
Identifiants
pubmed: 35252868
doi: 10.1093/narcan/zcac006
pii: zcac006
pmc: PMC8894079
doi:
Types de publication
Journal Article
Langues
eng
Pagination
zcac006Subventions
Organisme : Wellcome Trust
Pays : United Kingdom
Informations de copyright
© The Author(s) 2022. Published by Oxford University Press on behalf of NAR Cancer.
Références
Genome Res. 2012 Feb;22(2):299-306
pubmed: 22009989
Nucleic Acids Res. 2020 Jan 8;48(D1):D498-D503
pubmed: 31691815
Clin Epigenetics. 2018 Apr 23;10:59
pubmed: 29713393
Discov Med. 2017 Jan;23(124):51-60
pubmed: 28245427
Cell Host Microbe. 2013 Aug 14;14(2):207-15
pubmed: 23954159
Cancer Res. 2005 Dec 1;65(23):10709-15
pubmed: 16322215
Hum Cell. 2021 Mar;34(2):654-666
pubmed: 33400243
Genome Biol. 2015 Aug 08;16:160
pubmed: 26253137
Comput Struct Biotechnol J. 2021 Feb 27;19:1335-1360
pubmed: 33777334
Int J Cancer. 2016 Feb 15;138(4):912-7
pubmed: 26317688
Oncotarget. 2015 Sep 8;6(26):22613-23
pubmed: 26158901
Int J Cancer. 1992 Nov 11;52(5):743-9
pubmed: 1330933
Brain Res. 2010 Nov 4;1359:14-21
pubmed: 20816946
Oral Oncol. 2017 Oct;73:56-64
pubmed: 28939077
Clin Infect Dis. 2015 Jan 15;60(2):208-15
pubmed: 25305284
DNA Cell Biol. 2009 Aug;28(8):405-11
pubmed: 19485767
Nature. 2015 Jan 29;517(7536):576-82
pubmed: 25631445
Cancer Immunol Res. 2018 Nov;6(11):1327-1336
pubmed: 30228205
Biomed Res Int. 2020 Aug 27;2020:5236236
pubmed: 32908896
BMC Bioinformatics. 2020 Dec 3;21(Suppl 9):523
pubmed: 33272199
Oncogene. 2021 Jan;40(4):863-874
pubmed: 33262464
Nat Genet. 2020 Mar;52(3):320-330
pubmed: 32025001
Sci Rep. 2021 Apr 12;11(1):7870
pubmed: 33846399
Gastroenterology. 2017 Mar;152(4):851-866.e24
pubmed: 27876571
Nat Commun. 2020 Jun 26;11(1):3259
pubmed: 32591509
Carcinogenesis. 2013 Nov;34(11):2443-51
pubmed: 23740840
Br J Cancer. 2015 Jun 9;112(12):1958-65
pubmed: 25973533
Oncotarget. 2021 Mar 16;12(6):578-588
pubmed: 33796225
N Engl J Med. 2007 May 10;356(19):1944-56
pubmed: 17494927
JAMA Oncol. 2015 Aug;1(5):653-61
pubmed: 26181352
Int J Cancer. 2019 Aug 1;145(3):775-784
pubmed: 30671943
Genome Biol. 2014;15(12):550
pubmed: 25516281
Brief Bioinform. 2021 Mar 22;22(2):1065-1075
pubmed: 33479725
Front Oncol. 2020 Sep 15;10:1701
pubmed: 33042814
Nature. 2020 Apr;580(7802):269-273
pubmed: 32106218
Nat Methods. 2015 May;12(5):453-7
pubmed: 25822800
J Cell Physiol. 2016 Jan;231(1):25-30
pubmed: 26031493
Sci Rep. 2017 May 12;7(1):1834
pubmed: 28500338
Science. 2017 Dec 15;358(6369):1443-1448
pubmed: 29170280
Infect Agent Cancer. 2016 Mar 03;11:12
pubmed: 26941832
Br J Cancer. 2020 Feb;122(3):306-314
pubmed: 31708575
Oncoimmunology. 2018 Jul 30;7(10):e1498439
pubmed: 30288365
Science. 2015 Apr 3;348(6230):80-6
pubmed: 25838377
Carcinogenesis. 2000 Apr;21(4):753-6
pubmed: 10753212
Gastroenterology. 1998 Sep;115(3):642-8
pubmed: 9721161
Cancer. 2003 Mar 15;97(6):1464-70
pubmed: 12627511
J Natl Cancer Inst. 2000 May 3;92(9):709-20
pubmed: 10793107
Front Microbiol. 2018 May 03;9:862
pubmed: 29774014
Nat Genet. 2008 Apr;40(4):380-2
pubmed: 18368124
Curr Protoc Mol Biol. 2011 Jul;Chapter 15:Unit 15.10
pubmed: 21732315
Circulation. 2007 Mar 27;115(12):1571-80
pubmed: 17372166
Biochem Biophys Res Commun. 2014 Jun 6;448(3):315-22
pubmed: 24388988
Oral Oncol. 1998 Jul;34(4):304-8
pubmed: 9813727
Front Cell Infect Microbiol. 2020 Jan 15;9:476
pubmed: 32010645
Head Neck. 2018 May;40(5):1091-1100
pubmed: 29356179
Cell Mol Biol (Noisy-le-grand). 2017 May 20;63(5):7-10
pubmed: 28719338
J Transl Med. 2006 Mar 28;4:14
pubmed: 16566840
Breast Cancer Res Treat. 2018 Jul;170(2):431-438
pubmed: 29564740
Sci Rep. 2017 Sep 18;7(1):11773
pubmed: 28924229
Gastroenterology. 1998 Aug;115(2):281-6
pubmed: 9679033
Clin Microbiol Infect. 2006 Aug;12(8):782-6
pubmed: 16842574
Cancer Epidemiol Biomarkers Prev. 2005 Apr;14(4):773-8
pubmed: 15824142
Signal Transduct Target Ther. 2021 Jul 12;6(1):263
pubmed: 34248142
Sci Rep. 2020 Jul 7;10(1):11163
pubmed: 32636465
BMC Infect Dis. 2017 Jan 5;17(1):30
pubmed: 28056826
Ann Oncol. 2020 Oct;31(10):1366-1375
pubmed: 32569727
Clin Cancer Res. 2009 Apr 1;15(7):2281-90
pubmed: 19318487
BMC Infect Dis. 2011 Jun 27;11:183
pubmed: 21707992
Arch Oral Biol. 2020 Apr;112:104669
pubmed: 32028171
Cell Host Microbe. 2014 Mar 12;15(3):317-28
pubmed: 24629338
J Exp Med. 2011 Apr 11;208(4):663-75
pubmed: 21464222
Am J Gastroenterol. 2005 Sep;100(9):2100-15
pubmed: 16128957
Bioinformatics. 2009 Aug 15;25(16):2078-9
pubmed: 19505943
Genome Res. 2012 Feb;22(2):292-8
pubmed: 22009990
Blood Adv. 2020 Mar 24;4(6):1145-1158
pubmed: 32208490
Life Sci. 2019 Jun 15;227:129-136
pubmed: 31002922
Cell. 2010 Mar 19;140(6):883-99
pubmed: 20303878
Genome Biol. 2019 Nov 28;20(1):257
pubmed: 31779668
Int J Cancer. 2019 Apr 15;144(8):2008-2019
pubmed: 30304546
J Med Internet Res. 2021 Jul 26;23(7):e27633
pubmed: 34309564
J Oral Microbiol. 2020 Nov 30;13(1):1849493
pubmed: 33391626