Implementation of prognostic machine learning algorithms in paediatric chronic respiratory conditions: a scoping review.

bronchiectasis cystic fibrosis paediatric asthma paediatric lung disaese

Journal

BMJ open respiratory research
ISSN: 2052-4439
Titre abrégé: BMJ Open Respir Res
Pays: England
ID NLM: 101638061

Informations de publication

Date de publication:
03 2022
Historique:
received: 02 12 2021
accepted: 06 03 2022
entrez: 17 3 2022
pubmed: 18 3 2022
medline: 24 3 2022
Statut: ppublish

Résumé

Machine learning (ML) holds great potential for predicting clinical outcomes in heterogeneous chronic respiratory diseases (CRD) affecting children, where timely individualised treatments offer opportunities for health optimisation. This paper identifies rate-limiting steps in ML prediction model development that impair clinical translation and discusses regulatory, clinical and ethical considerations for ML implementation. A scoping review of ML prediction models in paediatric CRDs was undertaken using the PRISMA extension scoping review guidelines. From 1209 results, 25 articles published between 2013 and 2021 were evaluated for features of a good clinical prediction model using the Transparent Reporting of a multivariable prediction model for Individual Prognosis Or Diagnosis (TRIPOD) guidelines.Most of the studies were in asthma (80%), with few in cystic fibrosis (12%), bronchiolitis (4%) and childhood wheeze (4%). There were inconsistencies in model reporting and studies were limited by a lack of validation, and absence of equations or code for replication. Clinician involvement during ML model development is essential and diversity, equity and inclusion should be assessed at each step of the ML pipeline to ensure algorithms do not promote or amplify health disparities among marginalised groups. As ML prediction studies become more frequent, it is important that models are rigorously developed using published guidelines and take account of regulatory frameworks which depend on model complexity, patient safety, accountability and liability.

Identifiants

pubmed: 35297371
pii: 9/1/e001165
doi: 10.1136/bmjresp-2021-001165
pmc: PMC8928277
pii:
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't Review Systematic Review

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : Medical Research Council
ID : MR/T041285/1
Pays : United Kingdom

Informations de copyright

© Author(s) (or their employer(s)) 2022. Re-use permitted under CC BY. Published by BMJ.

Déclaration de conflit d'intérêts

Competing interests: GD reports personal fees from Chiesi Ltd and Vertex Pharmaceuticals, outside the submitted work. SS reports personal fees from Chiesi Pharmaceuticals and the European Respiratory Society, and leadership roles for the American Thoracic Society PFT committee, and the European Respiratory Society: Global Lung Function Initiative Network. NS reports Elsevier paediatric pathology textbook royalties (author), outside the submitted work.

Références

Crit Care Med. 2020 May;48(5):623-633
pubmed: 32141923
N Engl J Med. 2018 Mar 15;378(11):981-983
pubmed: 29539284
J Allergy Clin Immunol. 2014 May;133(5):1289-300, 1300.e1-12
pubmed: 24892144
Pediatr Pulmonol. 2019 Aug;54(8):1149-1155
pubmed: 31006993
JAMA Intern Med. 2018 Nov 1;178(11):1544-1547
pubmed: 30128552
JAMA Netw Open. 2019 Jan 4;2(1):e186937
pubmed: 30646206
PLoS One. 2021 Aug 2;16(8):e0255261
pubmed: 34339438
JAMA. 2020 Jul 21;324(3):235-236
pubmed: 32134437
Sci Transl Med. 2018 Dec 12;10(471):
pubmed: 30541791
Annu Rev Biomed Data Sci. 2021 Jul;4:123-144
pubmed: 34396058
NPJ Digit Med. 2020 Sep 11;3:118
pubmed: 32984550
Ann Am Thorac Soc. 2018 Jan;15(1):49-58
pubmed: 29048949
Lancet Digit Health. 2020 Dec;2(12):e677-e680
pubmed: 33328030
J Breath Res. 2016 Feb 19;10(1):016014
pubmed: 26893372
Nat Methods. 2018 Apr;15(4):233-234
pubmed: 30100822
PLoS One. 2019 Feb 19;14(2):e0212356
pubmed: 30779785
NPJ Digit Med. 2018 Oct 2;1:50
pubmed: 31304329
Diagnostics (Basel). 2020 May 06;10(5):
pubmed: 32384684
BMJ Open. 2021 Sep 21;11(9):e047279
pubmed: 34548347
Am J Respir Crit Care Med. 2021 Aug 1;204(3):374-376
pubmed: 34081880
Eur Respir J. 2010 Aug;36(2):225-8
pubmed: 20675775
BMC Med Inform Decis Mak. 2015 Oct 14;15:84
pubmed: 26467091
Radiographics. 2017 Mar-Apr;37(2):505-515
pubmed: 28212054
Pediatr Pulmonol. 2017 Jul;52(7):880-890
pubmed: 28557381
BMC Med. 2015 Jan 06;13:1
pubmed: 25563062
Ann Intern Med. 2019 Jan 1;170(1):W1-W33
pubmed: 30596876
Am J Respir Crit Care Med. 2018 Aug 1;198(3):320-328
pubmed: 29688023
Lancet Digit Health. 2021 Mar;3(3):e195-e203
pubmed: 33478929
Eur Respir Rev. 2020 Oct 1;29(157):
pubmed: 33004526
J Breath Res. 2021 Feb 25;15(2):026012
pubmed: 33630756
Eur Respir J. 2013 Jul;42(1):98-106
pubmed: 23645402
BMC Med. 2019 Oct 29;17(1):195
pubmed: 31665002
Allergy Asthma Proc. 2016 May;37(3):231-41
pubmed: 27074977
Eur Respir J. 2021 Aug 5;58(2):
pubmed: 33446607
Pulm Ther. 2020 Jun;6(1):67-77
pubmed: 32048244
Ann Intern Med. 2015 Jan 6;162(1):W1-73
pubmed: 25560730
BMJ. 2020 Apr 7;369:m1328
pubmed: 32265220
J Allergy Clin Immunol. 2019 May;143(5):1752-1759.e6
pubmed: 30445065
PLoS One. 2020 Jun 12;15(6):e0234722
pubmed: 32530947
J Am Med Inform Assoc. 2017 Jan;24(1):198-208
pubmed: 27189013
J Am Med Inform Assoc. 2001 Jul-Aug;8(4):391-7
pubmed: 11418546
Clin Pharmacol Ther. 2021 Jan;109(1):87-100
pubmed: 32449163
PLoS One. 2012;7(2):e32844
pubmed: 22393453
Nat Med. 2021 Oct;27(10):1663-1665
pubmed: 34635854
Ann Intern Med. 2018 Oct 2;169(7):467-473
pubmed: 30178033
Children (Basel). 2021 May 10;8(5):
pubmed: 34068718
PLoS One. 2021 Mar 1;16(3):e0247784
pubmed: 33647071
J Allergy Clin Immunol. 2021 Jun;147(6):2108-2117
pubmed: 33197460
Int J Med Inform. 2021 Jul;151:104468
pubmed: 33940479
Am J Respir Crit Care Med. 2021 Aug 15;204(4):389-390
pubmed: 34097833
BMC Res Notes. 2018 Jul 31;11(1):522
pubmed: 30064478
Thorax. 2020 Aug;75(8):695-701
pubmed: 32409611
J Med Syst. 2019 Apr 26;43(6):158
pubmed: 31028489
Appl Clin Inform. 2013 Aug 07;4(3):376-91
pubmed: 24155790
Acad Emerg Med. 2018 Dec;25(12):1463-1470
pubmed: 30382605
Nat Med. 2019 Sep;25(9):1337-1340
pubmed: 31427808
Acad Pediatr. 2022 Jan-Feb;22(1):55-61
pubmed: 34329757

Auteurs

Nicole Filipow (N)

UCL Great Ormond Street Institute of Child Health, University College London, London, UK nicole.filipow.18@ucl.ac.uk.

Eleanor Main (E)

UCL Great Ormond Street Institute of Child Health, University College London, London, UK.

Neil J Sebire (NJ)

Population, Policy and Practice Research and Teaching Department, UCL Great Ormond Street Institute of Child Health, University College London, London, UK.
GOSH NIHR BRC, Great Ormond Street Hospital for Children, London, UK.

John Booth (J)

Population, Policy and Practice Research and Teaching Department, UCL Great Ormond Street Institute of Child Health, University College London, London, UK.
GOSH NIHR BRC, Great Ormond Street Hospital for Children, London, UK.

Andrew M Taylor (AM)

GOSH NIHR BRC, Great Ormond Street Hospital for Children, London, UK.
Institute of Cardiovascular Science, University College London, London, UK.

Gwyneth Davies (G)

Population, Policy and Practice Research and Teaching Department, UCL Great Ormond Street Institute of Child Health, University College London, London, UK.
GOSH NIHR BRC, Great Ormond Street Hospital for Children, London, UK.

Sanja Stanojevic (S)

Community Health and Epidemiology, Dalhousie University, Halifax, Nova Scotia, Canada.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH