microRNA profile of Hermetia illucens (black soldier fly) and its implications on mass rearing.


Journal

PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081

Informations de publication

Date de publication:
2022
Historique:
received: 15 10 2021
accepted: 02 03 2022
entrez: 17 3 2022
pubmed: 18 3 2022
medline: 6 5 2022
Statut: epublish

Résumé

The growing demands on protein producers and the dwindling available resources have made Hermetia illucens (the black soldier fly, BSF) an economically important species. Insights into the genome of this insect will better allow for robust breeding protocols, and more efficient production to be used as a replacement of animal feed protein. The use of microRNA as a method to understand how gene regulation allows insect species to adapt to changes in their environment, has been established in multiple species. The baseline and life stage expression levels established in this study, allow for insight into the development and sex-linked microRNA regulation in BSF. To accomplish this, microRNA was extracted and sequenced from 15 different libraries with each life stage in triplicate. Of the total 192 microRNAs found, 168 were orthologous to known arthropod microRNAs and 24 microRNAs were unique to BSF. Twenty-six of the 168 microRNAs conserved across arthropods had a statistically significant (p < 0.05) differential expression between Egg to Larval stages. The development from larva to pupa was characterized by 16 statistically significant differentially expressed microRNA. Seven and 9 microRNA were detected as statistically significant between pupa to adult female and pupa to adult male, respectively. All life stages had a nearly equal split between up and down regulated microRNAs. Ten of the unique 24 miRNA were detected exclusively in one life stage. The egg life stage expressed five microRNA (hil-miR-m, hil-miR-p, hil-miR-r, hil-miR-s, and hil-miR-u) not seen in any other life stages. The female adult and pupa life stages expressed one miRNA each hil-miR-h and hil-miR-ac respectively. Both male and female adult life stages expressed hil-miR-a, hil-miR-b, and hil-miR-y. There were no unique microRNAs found only in the larva stage. Twenty-two microRNAs with 56 experimentally validated target genes in the closely related Drosophila melanogaster were identified. Thus, the microRNA found display the unique evolution of BSF, along with the life stages and potential genes to target for robust mass rearing. Understanding of the microRNA expression in BSF will further their use in the crucial search for alternative and sustainable protein sources.

Identifiants

pubmed: 35298540
doi: 10.1371/journal.pone.0265492
pii: PONE-D-21-33119
pmc: PMC8929568
doi:

Substances chimiques

MicroRNAs 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0265492

Déclaration de conflit d'intérêts

The authors have declared that no competing interests exist.

Références

Curr Biol. 2008 Jul 8;18(13):943-50
pubmed: 18571409
Cell. 2003 Apr 4;113(1):25-36
pubmed: 12679032
Nature. 2000 Nov 2;408(6808):86-9
pubmed: 11081512
Sci Rep. 2016 Nov 24;6:37736
pubmed: 27883064
G3 (Bethesda). 2021 May 7;11(5):
pubmed: 33734373
Int J Mol Sci. 2020 Jul 13;21(14):
pubmed: 32668813
PLoS One. 2016 Jul 21;11(7):e0159591
pubmed: 27441641
Insect Biochem Mol Biol. 2014 Oct;53:13-21
pubmed: 25016132
PLoS Biol. 2015 Apr 16;13(4):e1002078
pubmed: 25879221
Waste Manag Res. 2009 Sep;27(6):603-10
pubmed: 19502252
Insect Biochem Mol Biol. 2012 Jun;42(6):381-95
pubmed: 22406339
Nucleic Acids Res. 2019 Jan 8;47(D1):D155-D162
pubmed: 30423142
Nucleic Acids Res. 2014 Jan;42(Database issue):D68-73
pubmed: 24275495
Genome Biol. 2009;10(3):R25
pubmed: 19261174
Insect Biochem Mol Biol. 2013 Apr;43(4):388-97
pubmed: 23103375
Nucleic Acids Res. 2021 Jan 8;49(D1):D899-D907
pubmed: 33219682
Nucleic Acids Res. 2020 Jan 8;48(D1):D148-D154
pubmed: 31647101
BMC Syst Biol. 2015;9 Suppl 3:S5
pubmed: 26050794
Nucleic Acids Res. 2004 Jan 1;32(Database issue):D109-11
pubmed: 14681370
Genome Biol. 2014;15(12):550
pubmed: 25516281
Nucleic Acids Res. 2012 Jan;40(1):37-52
pubmed: 21911355
J Econ Entomol. 2002 Feb;95(1):214-20
pubmed: 11942759
Insect Biochem Mol Biol. 2007 Jan;37(1):3-9
pubmed: 17175441
Cell Res. 2020 Jan;30(1):50-60
pubmed: 31767972
Curr Biol. 2003 Apr 29;13(9):790-5
pubmed: 12725740
Genes Dev. 2008 Jun 15;22(12):1591-6
pubmed: 18559475
Nucleic Acids Res. 2003 Jan 1;31(1):439-41
pubmed: 12520045
Poult Sci. 2020 Jun;99(6):3133-3143
pubmed: 32475450
Nucleic Acids Res. 2008 Jan;36(Database issue):D154-8
pubmed: 17991681
Appl Environ Microbiol. 2018 Apr 16;84(9):
pubmed: 29475866
Fish Shellfish Immunol. 2021 Apr;111:111-118
pubmed: 33508473
Protein Cell. 2016 Feb;7(2):100-13
pubmed: 26399619
Ecol Evol. 2020 Jul 07;10(14):7291-7305
pubmed: 32760529
Parasit Vectors. 2019 May 15;12(1):235
pubmed: 31092286
Animals (Basel). 2021 Mar 13;11(3):
pubmed: 33805823
Trends Parasitol. 2013 Jun;29(6):295-303
pubmed: 23680188
Curr Opin Insect Sci. 2015 Oct 1;11:1-7
pubmed: 26251827
Microb Biotechnol. 2019 May;12(3):528-543
pubmed: 30884189
Sci Rep. 2020 Nov 10;10(1):19448
pubmed: 33173088
BMC Genomics. 2017 Oct 11;18(1):774
pubmed: 29020923
Genes Dev. 2009 Sep 15;23(18):2179-91
pubmed: 19696147
RNA Biol. 2012 Mar;9(3):231-41
pubmed: 22617875
Genes Dev. 2010 Dec 15;24(24):2748-53
pubmed: 21159815
PLoS One. 2012;7(3):e32910
pubmed: 22412948
J Sci Food Agric. 2018 Dec;98(15):5776-5784
pubmed: 29752718
Sci Rep. 2019 Jul 12;9(1):10110
pubmed: 31300713
Animals (Basel). 2020 Jul 21;10(7):
pubmed: 32708338
Am J Trop Med Hyg. 2015 Nov;93(5):998-1001
pubmed: 26283742
Genome Res. 2007 Dec;17(12):1865-79
pubmed: 17989255
PLoS One. 2019 Apr 30;14(4):e0216160
pubmed: 31039194
Cell Tissue Res. 2019 Nov;378(2):221-238
pubmed: 31053891
RNA. 2003 Mar;9(3):277-9
pubmed: 12592000
Genome Biol. 2009;10(1):R6
pubmed: 19146710
Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
pubmed: 16381832
Genes Dev. 2005 Oct 1;19(19):2343-54
pubmed: 16166373
Nucleic Acids Res. 2011 Jan;39(Database issue):D152-7
pubmed: 21037258

Auteurs

Sarah DeRaedt (S)

South African National Bioinformatics Institute, South African Medical Research Council Bioinformatics Unit, The University of the Western Cape, Bellville, Western Cape, South Africa.

Anandi Bierman (A)

AgriProtein Technologies (Pty) Limited, Philippi, Western Cape, South Africa.

Peter van Heusden (P)

South African National Bioinformatics Institute, South African Medical Research Council Bioinformatics Unit, The University of the Western Cape, Bellville, Western Cape, South Africa.

Cameron Richards (C)

AgriProtein Technologies (Pty) Limited, Philippi, Western Cape, South Africa.

Alan Christoffels (A)

South African National Bioinformatics Institute, South African Medical Research Council Bioinformatics Unit, The University of the Western Cape, Bellville, Western Cape, South Africa.

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Classifications MeSH