Genome Sequences of 25 SARS-CoV-2 Sublineage B.1.1.529 Omicron Strains in Bangladesh.


Journal

Microbiology resource announcements
ISSN: 2576-098X
Titre abrégé: Microbiol Resour Announc
Pays: United States
ID NLM: 101728794

Informations de publication

Date de publication:
21 Apr 2022
Historique:
pubmed: 25 3 2022
medline: 25 3 2022
entrez: 24 3 2022
Statut: ppublish

Résumé

We report the coding-complete genome sequences of 25 severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) sublineage B.1.1.529 Omicron strains obtained from Bangladeshi individuals in samples collected between December 2021 and January 2022. Genomic data were generated by Nanopore sequencing using the amplicon sequencing approach developed by the ARTIC Network.

Identifiants

pubmed: 35323016
doi: 10.1128/mra.00119-22
pmc: PMC9022525
doi:

Types de publication

Journal Article

Langues

eng

Pagination

e0011922

Subventions

Organisme : United States Agency for International Development (USAID)
Organisme : Bill and Melinda Gates Foundation (GF)

Références

Int J Antimicrob Agents. 2020 Mar;55(3):105924
pubmed: 32081636
bioRxiv. 2020 Sep 04;:
pubmed: 32908977
MedComm (2020). 2021 Dec 16;2(4):838-845
pubmed: 34957469

Auteurs

Omar Hamza Bin Manjur (OH)

Institute for Developing Science and Health Initiatives, Dhaka, Bangladesh.

Mokibul Hassan Afrad (MH)

International Centre for Diarrheal Disease Research, Bangladesh, Dhaka, Bangladesh.

Manjur Hossain Khan (MH)

Institute of Epidemiology, Disease Control, and Research, Dhaka, Bangladesh.

Mohabbat Hossain (M)

Institute for Developing Science and Health Initiatives, Dhaka, Bangladesh.

Zannat Kawser (Z)

Institute for Developing Science and Health Initiatives, Dhaka, Bangladesh.

Ahmed Nawsher Alam (AN)

Institute of Epidemiology, Disease Control, and Research, Dhaka, Bangladesh.

Nandita Banik (N)

Institute of Epidemiology, Disease Control, and Research, Dhaka, Bangladesh.

Saruar Alam (S)

Institute for Developing Science and Health Initiatives, Dhaka, Bangladesh.

Mallick Masum Billah (MM)

Institute of Epidemiology, Disease Control, and Research, Dhaka, Bangladesh.

Nawroz Afreen (N)

Institute of Epidemiology, Disease Control, and Research, Dhaka, Bangladesh.

Farhana Khanam (F)

International Centre for Diarrheal Disease Research, Bangladesh, Dhaka, Bangladesh.

Taufiqur Rahman Bhuiyan (TR)

International Centre for Diarrheal Disease Research, Bangladesh, Dhaka, Bangladesh.

Mohammed Ziaur Rahman (MZ)

International Centre for Diarrheal Disease Research, Bangladesh, Dhaka, Bangladesh.

Emilie Westeel (E)

Fondation Mérieux, Direction Médicale et Scientifique, Lyon, France.

Jean-Luc Berland (JL)

Fondation Mérieux, Direction Médicale et Scientifique, Lyon, France.

Florence Komurian-Pradel (F)

Fondation Mérieux, Direction Médicale et Scientifique, Lyon, France.

Sayera Banu (S)

International Centre for Diarrheal Disease Research, Bangladesh, Dhaka, Bangladesh.

Mustafizur Rahman (M)

International Centre for Diarrheal Disease Research, Bangladesh, Dhaka, Bangladesh.

Nicholas R Thompson (NR)

Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridgeshire, United Kingdom.
London School of Hygiene and Tropical Medicine, London, United Kingdom.

Firdausi Qadri (F)

Institute of Epidemiology, Disease Control, and Research, Dhaka, Bangladesh.

Tahmina Shirin (T)

Institute of Epidemiology, Disease Control, and Research, Dhaka, Bangladesh.

Classifications MeSH