Use of U-Net Convolutional Neural Networks for Automated Segmentation of Fecal Material for Objective Evaluation of Bowel Preparation Quality in Colonoscopy.

U-NET artificial intelligence automated segmentation colonoscopy colonoscopy preparation quality

Journal

Diagnostics (Basel, Switzerland)
ISSN: 2075-4418
Titre abrégé: Diagnostics (Basel)
Pays: Switzerland
ID NLM: 101658402

Informations de publication

Date de publication:
01 Mar 2022
Historique:
received: 25 01 2022
revised: 22 02 2022
accepted: 24 02 2022
entrez: 25 3 2022
pubmed: 26 3 2022
medline: 26 3 2022
Statut: epublish

Résumé

Background: Adequate bowel cleansing is important for colonoscopy performance evaluation. Current bowel cleansing evaluation scales are subjective, with a wide variation in consistency among physicians and low reported rates of accuracy. We aim to use machine learning to develop a fully automatic segmentation method for the objective evaluation of the adequacy of colon preparation. Methods: Colonoscopy videos were retrieved from a video data cohort and transferred to qualified images, which were randomly divided into training, validation, and verification datasets. The fecal residue was manually segmented. A deep learning model based on the U-Net convolutional network architecture was developed to perform automatic segmentation. The performance of the automatic segmentation was evaluated on the overlap area with the manual segmentation. Results: A total of 10,118 qualified images from 119 videos were obtained. The model averaged 0.3634 s to segmentate one image automatically. The models produced a strong high-overlap area with manual segmentation, with 94.7% ± 0.67% of that area predicted by our AI model, which correlated well with the area measured manually (r = 0.915, p < 0.001). The AI system can be applied in real-time qualitatively and quantitatively. Conclusions: We established a fully automatic segmentation method to rapidly and accurately mark the fecal residue-coated mucosa for the objective evaluation of colon preparation.

Identifiants

pubmed: 35328166
pii: diagnostics12030613
doi: 10.3390/diagnostics12030613
pmc: PMC8947406
pii:
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : Taipei Veterans General Hospital
ID : V108B-020, V109B-041, V1083-004-4, V109E-002-5, V110E-002-3

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Auteurs

Yen-Po Wang (YP)

Endoscopy Center for Diagnosis and Treatment, Department of Medicine, Taipei Veterans General Hospital, Taipei 112, Taiwan.
Division of Gastroenterology, Department of Medicine, Taipei Veterans General Hospital, Taipei 112, Taiwan.
Institute of Brain Science, National Yang Ming Chiao Tung University School of Medicine, Taipei 112, Taiwan.
Faculty of Medicine, National Yang Ming Chiao Tung University School of Medicine, Taipei 112, Taiwan.

Ying-Chun Jheng (YC)

Endoscopy Center for Diagnosis and Treatment, Department of Medicine, Taipei Veterans General Hospital, Taipei 112, Taiwan.
Faculty of Medicine, National Yang Ming Chiao Tung University School of Medicine, Taipei 112, Taiwan.
Department of Medical Research, Taipei Veterans General Hospital, Taipei 112, Taiwan.

Kuang-Yi Sung (KY)

Endoscopy Center for Diagnosis and Treatment, Department of Medicine, Taipei Veterans General Hospital, Taipei 112, Taiwan.
Division of Gastroenterology, Department of Medicine, Taipei Veterans General Hospital, Taipei 112, Taiwan.
Faculty of Medicine, National Yang Ming Chiao Tung University School of Medicine, Taipei 112, Taiwan.

Hung-En Lin (HE)

Endoscopy Center for Diagnosis and Treatment, Department of Medicine, Taipei Veterans General Hospital, Taipei 112, Taiwan.
Division of Gastroenterology, Department of Medicine, Taipei Veterans General Hospital, Taipei 112, Taiwan.
Faculty of Medicine, National Yang Ming Chiao Tung University School of Medicine, Taipei 112, Taiwan.

I-Fang Hsin (IF)

Endoscopy Center for Diagnosis and Treatment, Department of Medicine, Taipei Veterans General Hospital, Taipei 112, Taiwan.
Division of Gastroenterology, Department of Medicine, Taipei Veterans General Hospital, Taipei 112, Taiwan.
Faculty of Medicine, National Yang Ming Chiao Tung University School of Medicine, Taipei 112, Taiwan.

Ping-Hsien Chen (PH)

Endoscopy Center for Diagnosis and Treatment, Department of Medicine, Taipei Veterans General Hospital, Taipei 112, Taiwan.
Division of Gastroenterology, Department of Medicine, Taipei Veterans General Hospital, Taipei 112, Taiwan.
Faculty of Medicine, National Yang Ming Chiao Tung University School of Medicine, Taipei 112, Taiwan.

Yuan-Chia Chu (YC)

Information Management Office, Taipei Veterans General Hospital, Taipei 112, Taiwan.
Big Data Center, Taipei Veterans General Hospital, Taipei 112, Taiwan.
Department of Information Management, National Taipei University of Nursing and Health Sciences, Taipei 112, Taiwan.

David Lu (D)

Endoscopy Center for Diagnosis and Treatment, Department of Medicine, Taipei Veterans General Hospital, Taipei 112, Taiwan.

Yuan-Jen Wang (YJ)

Faculty of Medicine, National Yang Ming Chiao Tung University School of Medicine, Taipei 112, Taiwan.
Healthcare and Management Center, Taipei Veterans General Hospital, Taipei 112, Taiwan.

Ming-Chih Hou (MC)

Endoscopy Center for Diagnosis and Treatment, Department of Medicine, Taipei Veterans General Hospital, Taipei 112, Taiwan.
Division of Gastroenterology, Department of Medicine, Taipei Veterans General Hospital, Taipei 112, Taiwan.
Faculty of Medicine, National Yang Ming Chiao Tung University School of Medicine, Taipei 112, Taiwan.

Fa-Yauh Lee (FY)

Division of Gastroenterology, Department of Medicine, Taipei Veterans General Hospital, Taipei 112, Taiwan.
Faculty of Medicine, National Yang Ming Chiao Tung University School of Medicine, Taipei 112, Taiwan.

Ching-Liang Lu (CL)

Endoscopy Center for Diagnosis and Treatment, Department of Medicine, Taipei Veterans General Hospital, Taipei 112, Taiwan.
Division of Gastroenterology, Department of Medicine, Taipei Veterans General Hospital, Taipei 112, Taiwan.
Institute of Brain Science, National Yang Ming Chiao Tung University School of Medicine, Taipei 112, Taiwan.
Faculty of Medicine, National Yang Ming Chiao Tung University School of Medicine, Taipei 112, Taiwan.

Classifications MeSH