DLMM as a lossless one-shot algorithm for collaborative multi-site distributed linear mixed models.


Journal

Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555

Informations de publication

Date de publication:
30 03 2022
Historique:
received: 18 05 2021
accepted: 03 03 2022
entrez: 31 3 2022
pubmed: 1 4 2022
medline: 2 4 2022
Statut: epublish

Résumé

Linear mixed models are commonly used in healthcare-based association analyses for analyzing multi-site data with heterogeneous site-specific random effects. Due to regulations for protecting patients' privacy, sensitive individual patient data (IPD) typically cannot be shared across sites. We propose an algorithm for fitting distributed linear mixed models (DLMMs) without sharing IPD across sites. This algorithm achieves results identical to those achieved using pooled IPD from multiple sites (i.e., the same effect size and standard error estimates), hence demonstrating the lossless property. The algorithm requires each site to contribute minimal aggregated data in only one round of communication. We demonstrate the lossless property of the proposed DLMM algorithm by investigating the associations between demographic and clinical characteristics and length of hospital stay in COVID-19 patients using administrative claims from the UnitedHealth Group Clinical Discovery Database. We extend this association study by incorporating 120,609 COVID-19 patients from 11 collaborative data sources worldwide.

Identifiants

pubmed: 35354802
doi: 10.1038/s41467-022-29160-4
pii: 10.1038/s41467-022-29160-4
pmc: PMC8967932
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1678

Subventions

Organisme : NIA NIH HHS
ID : R56 AG069880
Pays : United States
Organisme : NLM NIH HHS
ID : R01 LM013519
Pays : United States
Organisme : NCI NIH HHS
ID : P30 CA091842
Pays : United States
Organisme : NLM NIH HHS
ID : R01 LM012607
Pays : United States
Organisme : NIAID NIH HHS
ID : R01 AI130460
Pays : United States
Organisme : NIA NIH HHS
ID : R56 AG074604
Pays : United States
Organisme : NIA NIH HHS
ID : R01 AG073435
Pays : United States

Informations de copyright

© 2022. The Author(s).

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Auteurs

Chongliang Luo (C)

Department of Biostatistics, Epidemiology and Informatics, University of Pennsylvania, Philadelphia, PA, USA.
Division of Public Health Sciences, Washington University School of Medicine in St. Louis, St. Louis, MO, USA.

Md Nazmul Islam (MN)

Optum Labs, Minnetonka, MN, USA.

Natalie E Sheils (NE)

Optum Labs, Minnetonka, MN, USA.

John Buresh (J)

Optum Labs, Minnetonka, MN, USA.

Jenna Reps (J)

Janssen Research and Development LLC, Titusville, NJ, USA.

Martijn J Schuemie (MJ)

Janssen Research and Development LLC, Titusville, NJ, USA.

Patrick B Ryan (PB)

Janssen Research and Development LLC, Titusville, NJ, USA.

Mackenzie Edmondson (M)

Department of Biostatistics, Epidemiology and Informatics, University of Pennsylvania, Philadelphia, PA, USA.

Rui Duan (R)

Department of Biostatistics, Epidemiology and Informatics, University of Pennsylvania, Philadelphia, PA, USA.
Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA, USA.

Jiayi Tong (J)

Department of Biostatistics, Epidemiology and Informatics, University of Pennsylvania, Philadelphia, PA, USA.

Arielle Marks-Anglin (A)

Department of Biostatistics, Epidemiology and Informatics, University of Pennsylvania, Philadelphia, PA, USA.

Jiang Bian (J)

Department of Health Outcomes and Biomedical Informatics, College of Medicine, University of Florida, Gainesville, FL, USA.

Zhaoyi Chen (Z)

Department of Health Outcomes and Biomedical Informatics, College of Medicine, University of Florida, Gainesville, FL, USA.

Talita Duarte-Salles (T)

Fundacio Institut Universitari per a la recerca a l'Atencio Primaria de Salut Jordi Gol i Gurina (IDIAPJGol), Barcelona, Spain.

Sergio Fernández-Bertolín (S)

Fundacio Institut Universitari per a la recerca a l'Atencio Primaria de Salut Jordi Gol i Gurina (IDIAPJGol), Barcelona, Spain.

Thomas Falconer (T)

Department of Biomedical Informatics, Columbia University, New York, NY, USA.

Chungsoo Kim (C)

Department of Biomedical Sciences, Ajou University Graduate School of Medicine, Suwon, Republic of Korea.

Rae Woong Park (RW)

Department of Biomedical Sciences, Ajou University Graduate School of Medicine, Suwon, Republic of Korea.
Department of Biomedical Informatics, Ajou University School of Medicine, Suwon, Republic of Korea.

Stephen R Pfohl (SR)

Stanford Center for Biomedical Informatics Research, Stanford, CA, USA.

Nigam H Shah (NH)

Stanford Center for Biomedical Informatics Research, Stanford, CA, USA.

Andrew E Williams (AE)

Institute for Clinical Research and Health Policy Studies, Tufts University School of Medicine, Boston, MA, USA.

Hua Xu (H)

School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA.

Yujia Zhou (Y)

School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA.

Ebbing Lautenbach (E)

Department of Biostatistics, Epidemiology and Informatics, University of Pennsylvania, Philadelphia, PA, USA.
Division of Infectious Diseases, Department of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Center for Clinical Epidemiology and Biostatistics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.

Jalpa A Doshi (JA)

Division of General Internal Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Leonard Davis Institute of Health Economics, Philadelphia, PA, USA.

Rachel M Werner (RM)

Division of General Internal Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Leonard Davis Institute of Health Economics, Philadelphia, PA, USA.
Cpl Michael J Crescenz VA Medical Center, Philadelphia, PA, USA.

David A Asch (DA)

Division of General Internal Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Leonard Davis Institute of Health Economics, Philadelphia, PA, USA.

Yong Chen (Y)

Department of Biostatistics, Epidemiology and Informatics, University of Pennsylvania, Philadelphia, PA, USA. ychen123@upenn.edu.

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