Short arms of human acrocentric chromosomes and the completion of the human genome sequence.


Journal

Genome research
ISSN: 1549-5469
Titre abrégé: Genome Res
Pays: United States
ID NLM: 9518021

Informations de publication

Date de publication:
04 2022
Historique:
pubmed: 2 4 2022
medline: 13 4 2022
entrez: 1 4 2022
Statut: ppublish

Résumé

The complete, ungapped sequence of the short arms of human acrocentric chromosomes (SAACs) is still unknown almost 20 years after the near completion of the Human Genome Project. Yet these short arms of Chromosomes 13, 14, 15, 21, and 22 contain the ribosomal DNA (rDNA) genes, which are of paramount importance for human biology. The sequences of SAACs show an extensive variation in the copy number of the various repetitive elements, the full extent of which is currently unknown. In addition, the full spectrum of repeated sequences, their organization, and the low copy number functional elements are also unknown. The Telomere-to-Telomere (T2T) Project using mainly long-read sequence technology has recently completed the assembly of the genome from a hydatidiform mole, CHM13, and has thus established a baseline reference for further studies on the organization, variation, functional annotation, and impact in human disorders of all the previously unknown genomic segments, including the SAACs. The publication of the initial results of the T2T Project will update and improve the reference genome for a better understanding of the evolution and function of the human genome.

Identifiants

pubmed: 35361624
pii: gr.275350.121
doi: 10.1101/gr.275350.121
pmc: PMC8997349
doi:

Substances chimiques

DNA, Ribosomal 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

599-607

Informations de copyright

© 2022 Antonarakis; Published by Cold Spring Harbor Laboratory Press.

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Auteurs

Stylianos E Antonarakis (SE)

Department of Genetic Medicine and Development, University of Geneva Medical Faculty, 1211 Geneva, Switzerland.
Foundation Campus Biotech, 1202 Geneva, Switzerland.
Medigenome, Swiss Institute of Genomic Medicine, 1207 Geneva, Switzerland.

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Classifications MeSH