CT-based severity assessment for COVID-19 using weakly supervised non-local CNN.
3D CNN
COVID-19 severity
Deep learning
Non-local attention
Squeeze
Journal
Applied soft computing
ISSN: 1568-4946
Titre abrégé: Appl Soft Comput
Pays: United States
ID NLM: 101536968
Informations de publication
Date de publication:
May 2022
May 2022
Historique:
received:
07
12
2021
revised:
28
02
2022
accepted:
17
03
2022
entrez:
4
4
2022
pubmed:
5
4
2022
medline:
5
4
2022
Statut:
ppublish
Résumé
Evaluating patient criticality is the foremost step in administering appropriate COVID-19 treatment protocols. Learning an Artificial Intelligence (AI) model from clinical data for automatic risk-stratification enables accelerated response to patients displaying critical indicators. Chest CT manifestations including ground-glass opacities and consolidations are a reliable indicator for prognostic studies and show variability with patient condition. To this end, we propose a novel attention framework to estimate COVID-19 severity as a regression score from a weakly annotated CT scan dataset. It takes a non-locality approach that correlates features across different parts and spatial scales of the 3D scan. An explicit guidance mechanism from limited infection labeling drives attention refinement and feature modulation. The resulting encoded representation is further enriched through cross-channel attention. The attention model also infuses global contextual awareness into the deep voxel features by querying the base CT scan to mine relevant features. Consequently, it learns to effectively localize its focus region and chisel out the infection precisely. Experimental validation on the MosMed dataset shows that the proposed architecture has significant potential in augmenting existing methods as it achieved a 0.84 R-squared score and 0.133 mean absolute difference.
Identifiants
pubmed: 35370523
doi: 10.1016/j.asoc.2022.108765
pii: S1568-4946(22)00196-X
pmc: PMC8962065
doi:
Types de publication
Journal Article
Langues
eng
Pagination
108765Informations de copyright
© 2022 Elsevier B.V. All rights reserved.
Déclaration de conflit d'intérêts
The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.
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