Deep learning-based velocity antialiasing of 4D-flow MRI.


Journal

Magnetic resonance in medicine
ISSN: 1522-2594
Titre abrégé: Magn Reson Med
Pays: United States
ID NLM: 8505245

Informations de publication

Date de publication:
07 2022
Historique:
revised: 13 01 2022
received: 14 08 2021
accepted: 07 02 2022
pubmed: 6 4 2022
medline: 30 4 2022
entrez: 5 4 2022
Statut: ppublish

Résumé

To develop a convolutional neural network (CNN) for the robust and fast correction of velocity aliasing in 4D-flow MRI. This study included 667 adult subjects with aortic 4D-flow MRI data with existing velocity aliasing (n = 362) and no velocity aliasing (n = 305). Additionally, 10 controls received back-to-back 4D-flow scans with systemically varied velocity-encoding sensitivity (vencs) at 60, 100, and 175 cm/s. The no-aliasing data sets were used to simulate velocity aliasing by reducing the venc to 40%-70% of the original, alongside a ground truth locating all aliased voxels (153 training, 152 testing). The 152 simulated and 362 existing aliasing data sets were used for testing and compared with a conventional velocity antialiasing algorithm. Dice scores were calculated to quantify CNN performance. For controls, the venc 175-cm/s scans were used as the ground truth and compared with the CNN-corrected venc 60 and 100 cm/s data sets RESULTS: The CNN required 176 ± 30 s to perform compared with 162 ± 14 s for the conventional algorithm. The CNN showed excellent performance for the simulated data compared with the conventional algorithm (median range of Dice scores CNN: [0.89-0.99], conventional algorithm: [0.84-0.94], p < 0.001, across all simulated vencs) and detected more aliased voxels in existing velocity aliasing data sets (median detected CNN: 159 voxels [31-605], conventional algorithm: 65 [7-417], p < 0.001). For controls, the CNN showed Dice scores of 0.98 [0.95-0.99] and 0.96 [0.87-0.99] for venc = 60 cm/s and 100 cm/s, respectively, while flow comparisons showed moderate-excellent agreement. Deep learning enabled fast and robust velocity anti-aliasing in 4D-flow MRI.

Identifiants

pubmed: 35381116
doi: 10.1002/mrm.29205
pmc: PMC9050855
mid: NIHMS1779790
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Pagination

449-463

Subventions

Organisme : NHLBI NIH HHS
ID : R01 HL115828
Pays : United States
Organisme : NHLBI NIH HHS
ID : R01 HL133504
Pays : United States
Organisme : NHLBI NIH HHS
ID : F30 HL145995
Pays : United States

Informations de copyright

© 2022 The Authors. Magnetic Resonance in Medicine published by Wiley Periodicals LLC on behalf of International Society for Magnetic Resonance in Medicine.

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Auteurs

Haben Berhane (H)

Department of Biomedical Engineering, Northwestern University, Evanston, Illinois, USA.
Department of Radiology, Northwestern Medicine, Chicago, Illinois, USA.

Michael B Scott (MB)

Department of Biomedical Engineering, Northwestern University, Evanston, Illinois, USA.
Department of Radiology, Northwestern Medicine, Chicago, Illinois, USA.

Alex J Barker (AJ)

Anschutz Medical Campus, University of Colorado, Aurora, Colorado, USA.

Patrick McCarthy (P)

Division of Cardiac Surgery, Northwestern Medicine, Chicago, Illinois, USA.

Ryan Avery (R)

Department of Radiology, Northwestern Medicine, Chicago, Illinois, USA.

Brad Allen (B)

Department of Radiology, Northwestern Medicine, Chicago, Illinois, USA.

Chris Malaisrie (C)

Division of Cardiac Surgery, Northwestern Medicine, Chicago, Illinois, USA.

Joshua D Robinson (JD)

Department of Medical Imaging, Lurie Children's Hospital of Chicago, Chicago, Illinois, USA.

Cynthia K Rigsby (CK)

Department of Radiology, Northwestern Medicine, Chicago, Illinois, USA.
Department of Medical Imaging, Lurie Children's Hospital of Chicago, Chicago, Illinois, USA.

Michael Markl (M)

Department of Biomedical Engineering, Northwestern University, Evanston, Illinois, USA.
Department of Radiology, Northwestern Medicine, Chicago, Illinois, USA.

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