Avian auditory hair cell regeneration is accompanied by JAK/STAT-dependent expression of immune-related genes in supporting cells.

Basilar papilla Hair cells Regeneration Single cell RNA-sequencing Supporting cells

Journal

Development (Cambridge, England)
ISSN: 1477-9129
Titre abrégé: Development
Pays: England
ID NLM: 8701744

Informations de publication

Date de publication:
15 04 2022
Historique:
received: 23 09 2021
accepted: 31 03 2022
pubmed: 15 4 2022
medline: 6 5 2022
entrez: 14 4 2022
Statut: ppublish

Résumé

The avian hearing organ is the basilar papilla that, in sharp contrast to the mammalian cochlea, can regenerate sensory hair cells and thereby recover from deafness within weeks. The mechanisms that trigger, sustain and terminate the regenerative response in vivo are largely unknown. Here, we profile the changes in gene expression in the chicken basilar papilla after aminoglycoside antibiotic-induced hair cell loss using RNA-sequencing. We identified changes in gene expression of a group of immune-related genes and confirmed with single-cell RNA-sequencing that these changes occur in supporting cells. In situ hybridization was used to further validate these findings. We determined that the JAK/STAT signaling pathway is essential for upregulation of the damage-response genes in supporting cells during the second day after induction of hair cell loss. Four days after ototoxic damage, we identified newly regenerated, nascent auditory hair cells that express genes linked to termination of the JAK/STAT signaling response. The robust, transient expression of immune-related genes in supporting cells suggests a potential functional involvement of JAK/STAT signaling in sensory hair cell regeneration.

Identifiants

pubmed: 35420675
pii: 275061
doi: 10.1242/dev.200113
pmc: PMC10656459
pii:
doi:

Substances chimiques

Anti-Bacterial Agents 0
RNA 63231-63-0

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : NIDCD NIH HHS
ID : R01 DC019370
Pays : United States
Organisme : NIDCD NIH HHS
ID : R01 DC019619
Pays : United States
Organisme : NIDCD NIH HHS
ID : U01 DC019370
Pays : United States

Informations de copyright

© 2022. Published by The Company of Biologists Ltd.

Déclaration de conflit d'intérêts

Competing interests S.H. is a paid scientific advisor of Pipeline Therapeutics.

Références

Dev Cell. 2019 May 20;49(4):605-617.e5
pubmed: 31006648
Acta Biomater. 2017 Apr 15;53:13-28
pubmed: 28119112
J Neurosci. 1997 Aug 15;17(16):6289-301
pubmed: 9236239
J Neurosci. 2003 Oct 15;23(28):9320-7
pubmed: 14561859
Front Cell Neurosci. 2017 Apr 12;11:106
pubmed: 28446866
J Neurosci. 2003 Jun 1;23(11):4577-89
pubmed: 12805298
Cell Rep. 2022 Sep 27;40(13):111432
pubmed: 36170825
Cell. 2018 Aug 23;174(5):1247-1263.e15
pubmed: 30078710
Cell Rep. 2021 Mar 23;34(12):108900
pubmed: 33761346
Front Immunol. 2017 Sep 22;8:1187
pubmed: 29018447
Development. 1999 Feb;126(5):961-73
pubmed: 9927597
Nat Protoc. 2014 Jan;9(1):171-81
pubmed: 24385147
Cancer Immunol Immunother. 2005 Aug;54(8):729-40
pubmed: 15685448
Sci Rep. 2020 Apr 21;10(1):6740
pubmed: 32317718
Cell Rep. 2018 Jun 5;23(10):2901-2914.e13
pubmed: 29874578
J Comp Neurol. 1994 Aug 22;346(4):517-29
pubmed: 7983242
Nat Neurosci. 2000 Aug;3(8):786-90
pubmed: 10903571
Hear Res. 2013 Mar;297:113-20
pubmed: 23202051
Science. 1999 Jun 11;284(5421):1837-41
pubmed: 10364557
J Neurosci. 2012 Aug 1;32(31):10662-73
pubmed: 22855815
Annu Rev Cell Dev Biol. 2008;24:525-49
pubmed: 18598212
Hear Res. 2006 Dec;222(1-2):115-24
pubmed: 17081714
Nat Commun. 2016 Mar 22;7:11102
pubmed: 27000654
Laryngoscope. 1991 Nov;101(11):1139-49
pubmed: 1943414
Bioinformatics. 2018 Sep 1;34(17):i884-i890
pubmed: 30423086
J Comp Neurol. 1998 Aug 24;398(2):241-56
pubmed: 9700569
Nat Methods. 2017 Jun;14(6):584-586
pubmed: 28418000
Vet Sci. 2020 Jan 27;7(1):
pubmed: 32012730
Cell. 2009 Jun 26;137(7):1343-55
pubmed: 19563763
J Comp Neurol. 2008 Nov 20;511(3):396-414
pubmed: 18803241
J Assoc Res Otolaryngol. 2018 Feb;19(1):17-29
pubmed: 29134476
Genesis. 2014 May;52(5):424-30
pubmed: 24599776
Cell. 2018 Aug 23;174(5):1229-1246.e17
pubmed: 30078709
Cell Rep. 2014 Nov 20;9(4):1265-72
pubmed: 25457611
J Neurobiol. 1997 Nov 20;33(6):724-34
pubmed: 9369147
Int J Biochem Cell Biol. 2009 Nov;41(11):2118-21
pubmed: 19450707
Bioinformatics. 2013 Sep 1;29(17):2146-52
pubmed: 23821648
Nat Commun. 2021 May 11;12(1):2624
pubmed: 33976143
Int J Mol Sci. 2019 Apr 12;20(8):
pubmed: 31013709
Proc Natl Acad Sci U S A. 2020 Sep 8;117(36):22225-22236
pubmed: 32826333
Genome Biol. 2010;11(3):R25
pubmed: 20196867
Dev Comp Immunol. 2013 Nov;41(3):370-6
pubmed: 23751330
J Cell Biol. 2015 May 25;209(4):579-93
pubmed: 26008745
F1000Res. 2016 Jun 20;5:1438
pubmed: 27508061
Semin Cell Dev Biol. 2013 May;24(5):448-59
pubmed: 23545368
Otolaryngol Head Neck Surg. 1990 Sep;103(3):443-50
pubmed: 2122376
Nucleic Acids Res. 2020 Jan 8;48(D1):D498-D503
pubmed: 31691815
Hear Res. 2017 Sep;352:70-81
pubmed: 28526177
Front Cell Neurosci. 2015 Mar 31;9:96
pubmed: 25873860
Hear Res. 2013 Sep;303:20-9
pubmed: 23347917
Cell Rep. 2021 Mar 23;34(12):108902
pubmed: 33761357
Cell Death Differ. 1997 May;4(4):325-33
pubmed: 16465248
Bioinformatics. 2010 Jan 1;26(1):139-40
pubmed: 19910308
Bioinformatics. 2017 Jul 01;33(13):2050-2052
pubmed: 28203714
Front Immunol. 2017 Jan 31;8:49
pubmed: 28197148
Hear Res. 2018 May;362:14-24
pubmed: 29310977
Bioinformatics. 2017 Apr 15;33(8):1179-1186
pubmed: 28088763
Bioinformatics. 2013 Jan 1;29(1):15-21
pubmed: 23104886
Dev Dyn. 2007 Jan;236(1):156-70
pubmed: 17096404
Curr Opin Neurobiol. 2003 Feb;13(1):119-26
pubmed: 12593990
Nat Methods. 2021 Aug;18(8):843-844
pubmed: 34172972
J Neurosci. 1997 Nov 1;17(21):8270-82
pubmed: 9334402
Methods. 2001 Dec;25(4):402-8
pubmed: 11846609
Cell Host Microbe. 2015 Jan 14;17(1):85-97
pubmed: 25482432
J Neurosci. 2015 Nov 11;35(45):15050-61
pubmed: 26558776
FEBS J. 2018 Mar;285(6):1024-1029
pubmed: 28881486
Front Cell Neurosci. 2021 Jan 08;14:613246
pubmed: 33488362
Nat Commun. 2021 May 20;12(1):2970
pubmed: 34016972
J Neurosci Res. 2007 Jul;85(9):1970-9
pubmed: 17497672
Front Cell Neurosci. 2017 Aug 23;11:252
pubmed: 28878625
PLoS One. 2012;7(12):e51574
pubmed: 23240046
Cold Spring Harb Perspect Med. 2019 Apr 1;9(4):
pubmed: 30249599
Cell Mol Life Sci. 2009 Jan;66(2):275-300
pubmed: 19099190
Front Cell Neurosci. 2020 Nov 12;14:583994
pubmed: 33281558
Blood. 2010 Apr 15;115(15):3109-17
pubmed: 20130243
J Comp Neurol. 1993 May 1;331(1):75-96
pubmed: 8320349
J Comp Neurol. 2004 Jul 26;475(3):340-60
pubmed: 15221950
Int J Dev Biol. 2007;51(6-7):649-54
pubmed: 17891723
Sci Rep. 2020 Sep 16;10(1):15167
pubmed: 32938973
EMBO J. 2006 Jun 7;25(11):2358-67
pubmed: 16710296
Front Genet. 2019 Sep 25;10:858
pubmed: 31608109

Auteurs

Amanda S Janesick (AS)

Department of Otolaryngology - Head & Neck Surgery, Stanford University School of Medicine, Palo Alto, CA 94305, USA.
Institute for Stem Cell Biology & Regenerative Medicine, Stanford University School of Medicine, Palo Alto, CA 94305, USA.

Mirko Scheibinger (M)

Department of Otolaryngology - Head & Neck Surgery, Stanford University School of Medicine, Palo Alto, CA 94305, USA.
Institute for Stem Cell Biology & Regenerative Medicine, Stanford University School of Medicine, Palo Alto, CA 94305, USA.

Nesrine Benkafadar (N)

Department of Otolaryngology - Head & Neck Surgery, Stanford University School of Medicine, Palo Alto, CA 94305, USA.
Institute for Stem Cell Biology & Regenerative Medicine, Stanford University School of Medicine, Palo Alto, CA 94305, USA.

Sakin Kirti (S)

Department of Otolaryngology - Head & Neck Surgery, Stanford University School of Medicine, Palo Alto, CA 94305, USA.
Institute for Stem Cell Biology & Regenerative Medicine, Stanford University School of Medicine, Palo Alto, CA 94305, USA.

Stefan Heller (S)

Department of Otolaryngology - Head & Neck Surgery, Stanford University School of Medicine, Palo Alto, CA 94305, USA.
Institute for Stem Cell Biology & Regenerative Medicine, Stanford University School of Medicine, Palo Alto, CA 94305, USA.

Articles similaires

Vancomycin-associated DRESS demonstrates delay in AST abnormalities.

Ahmed Hussein, Kateri L Schoettinger, Jourdan Hydol-Smith et al.
1.00
Humans Drug Hypersensitivity Syndrome Vancomycin Female Male
Robotic Surgical Procedures Animals Humans Telemedicine Models, Animal

Odour generalisation and detection dog training.

Lyn Caldicott, Thomas W Pike, Helen E Zulch et al.
1.00
Animals Odorants Dogs Generalization, Psychological Smell
Animals TOR Serine-Threonine Kinases Colorectal Neoplasms Colitis Mice

Classifications MeSH