Synthesis of 4-thiouridines with prodrug functionalization for RNA metabolic labeling.
Journal
RSC chemical biology
ISSN: 2633-0679
Titre abrégé: RSC Chem Biol
Pays: England
ID NLM: 101768727
Informations de publication
Date de publication:
06 Apr 2022
06 Apr 2022
Historique:
received:
03
01
2022
accepted:
18
02
2022
entrez:
20
4
2022
pubmed:
21
4
2022
medline:
21
4
2022
Statut:
epublish
Résumé
Metabolic labeling has emerged as a powerful tool to endow RNA with reactive handles allowing for subsequent chemical derivatization and processing. Recently, thiolated nucleosides, such as 4-thiouridine (4sU), have attracted great interest in metabolic labeling-based RNA sequencing approaches (TUC-seq, SLAM-seq, TimeLapse-seq) to study cellular RNA expression and decay dynamics. For these and other applications (
Identifiants
pubmed: 35441143
doi: 10.1039/d2cb00001f
pii: d2cb00001f
pmc: PMC8985182
doi:
Types de publication
Journal Article
Langues
eng
Pagination
447-455Informations de copyright
This journal is © The Royal Society of Chemistry.
Déclaration de conflit d'intérêts
There are no conflicts to declare.
Références
Angew Chem Int Ed Engl. 2008;47(45):8719-22
pubmed: 18833560
Angew Chem Int Ed Engl. 2020 Nov 16;59(47):20814-20819
pubmed: 32870563
Nucleic Acids Res. 2018 Aug 21;46(14):6996-7005
pubmed: 29986098
Dev Cell. 2018 Aug 20;46(4):481-494.e6
pubmed: 30057273
J Med Chem. 1992 May 1;35(9):1650-62
pubmed: 1578493
J Med Chem. 2000 Nov 16;43(23):4570-4
pubmed: 11087582
ChemMedChem. 2013 Jun;8(6):985-93
pubmed: 23606629
Nat Biotechnol. 2011 May;29(5):436-42
pubmed: 21516085
Angew Chem Int Ed Engl. 2015 Aug 10;54(33):9622-6
pubmed: 26014370
Nucleosides Nucleotides Nucleic Acids. 2001 Apr-Jul;20(4-7):315-21
pubmed: 11563043
Genome Res. 2020 Oct;30(10):1481-1491
pubmed: 32843354
Antivir Chem Chemother. 2018 Jan-Dec;26:2040206618775243
pubmed: 29792071
Wiley Interdiscip Rev RNA. 2021 Sep;12(5):e1650
pubmed: 33738981
J Med Chem. 2007 Mar 22;50(6):1335-46
pubmed: 17328534
Pharmaceutics. 2021 Mar 10;13(3):
pubmed: 33802215
Pharmaceutics. 2021 Jan 09;13(1):
pubmed: 33435273
Nat Methods. 2017 Dec;14(12):1198-1204
pubmed: 28945705
Angew Chem Int Ed Engl. 2017 Oct 16;56(43):13479-13483
pubmed: 28817234
ACS Pharmacol Transl Sci. 2020 Oct 12;3(6):1225-1232
pubmed: 33344899
J Med Chem. 2018 Mar 22;61(6):2211-2226
pubmed: 28792763
ACS Med Chem Lett. 2018 Sep 11;9(10):986-989
pubmed: 30344904
Antiviral Res. 2006 Sep;71(2-3):282-92
pubmed: 16735066
RNA Biol. 2018 Mar 4;15(3):359-368
pubmed: 29028411
J Med Chem. 2011 Apr 28;54(8):2878-90
pubmed: 21417463
Med Res Rev. 2000 Nov;20(6):417-51
pubmed: 11058891
FEMS Microbiol Rev. 2015 Mar;39(2):184-202
pubmed: 25725012
J Med Chem. 2005 Dec 15;48(25):8079-86
pubmed: 16335932
Methods Mol Biol. 2018;1720:25-34
pubmed: 29236249
ACS Chem Biol. 2019 Aug 16;14(8):1698-1707
pubmed: 31310712
J Med Chem. 2007 May 17;50(10):2424-31
pubmed: 17441704
Angew Chem Int Ed Engl. 2020 Dec 1;59(49):22063-22071
pubmed: 32379948
Org Lett. 2015 Jun 19;17(12):3008-10
pubmed: 26060887
Nat Struct Mol Biol. 2004 Oct;11(10):1008-14
pubmed: 15448679
Nucleic Acids Res. 2020 Dec 16;48(22):12566-12576
pubmed: 33245763
Methods. 2017 May 1;120:39-48
pubmed: 28219744
Chembiochem. 2018 Sep 17;19(18):1939-1943
pubmed: 29953711
Cell. 2010 Apr 2;141(1):129-41
pubmed: 20371350
Wiley Interdiscip Rev RNA. 2020 Jan;11(1):e1561
pubmed: 31392842
Nat Methods. 2018 Feb 28;15(3):171-172
pubmed: 29489745
Methods Mol Biol. 2018;1823:141-152
pubmed: 29959679
Methods Mol Biol. 2014;1125:277-86
pubmed: 24590796
Nat Methods. 2018 Mar;15(3):221-225
pubmed: 29355846
Nat Protoc. 2020 Feb;15(2):604-627
pubmed: 31915390
Science. 2016 Jun 3;352(6290):1225-8
pubmed: 27257258
J Am Chem Soc. 2020 Aug 26;142(34):14417-14421
pubmed: 32786764
Antivir Chem Chemother. 2001 Jul;12(4):223-32
pubmed: 11771731
RNA. 2008 Sep;14(9):1959-72
pubmed: 18658122
Methods Mol Biol. 2017;1507:129-140
pubmed: 27832537
Methods Mol Biol. 2020;2062:191-211
pubmed: 31768978
Chem Rev. 2014 Sep 24;114(18):9154-218
pubmed: 25144792
Chem Soc Rev. 2020 Dec 7;49(23):8749-8773
pubmed: 33084688
Top Curr Chem (Cham). 2016 Feb;374(1):4
pubmed: 27572987
Plant Cell. 2020 Apr;32(4):871-887
pubmed: 32060173
J Med Chem. 1995 Sep 29;38(20):3941-50
pubmed: 7562927
Chemistry. 2015 Nov 9;21(46):16421-6
pubmed: 26517040
Expert Opin Drug Deliv. 2009 Apr;6(4):405-20
pubmed: 19382883
Nat Commun. 2019 Jul 17;10(1):3138
pubmed: 31316066
Methods Enzymol. 2014;539:113-61
pubmed: 24581442
Nat Methods. 2020 Mar;17(3):311-318
pubmed: 32015544
Angew Chem Int Ed Engl. 2020 Apr 20;59(17):6881-6886
pubmed: 31999864
Mol Aspects Med. 2013 Apr-Jun;34(2-3):529-47
pubmed: 23506887