Clinical and transcriptomic features of persistent exacerbation-prone severe asthma in U-BIOPRED cohort.

CEACAM5 asthma exacerbations frequent exacerbators persistent frequent exacerbators severe asthma

Journal

Clinical and translational medicine
ISSN: 2001-1326
Titre abrégé: Clin Transl Med
Pays: United States
ID NLM: 101597971

Informations de publication

Date de publication:
04 2022
Historique:
revised: 24 03 2022
received: 19 11 2021
accepted: 29 03 2022
entrez: 27 4 2022
pubmed: 28 4 2022
medline: 29 4 2022
Statut: ppublish

Résumé

Exacerbation-prone asthma is a feature of severe disease. However, the basis for its persistency remains unclear. To determine the clinical and transcriptomic features of frequent exacerbators (FEs) and persistent FEs (PFEs) in the U-BIOPRED cohort. We compared features of FE (≥2 exacerbations in past year) to infrequent exacerbators (IE, <2 exacerbations) and of PFE with repeat ≥2 exacerbations during the following year to persistent IE (PIE). Transcriptomic data in blood, bronchial and nasal epithelial brushings, bronchial biopsies and sputum cells were analysed by gene set variation analysis for 103 gene signatures. Of 317 patients, 62.4% had FE, of whom 63.6% had PFE, while 37.6% had IE, of whom 61.3% had PIE. Using multivariate analysis, FE was associated with short-acting beta-agonist use, sinusitis and daily oral corticosteroid use, while PFE was associated with eczema, short-acting beta-agonist use and asthma control index. CEA cell adhesion molecule 5 (CEACAM5) was the only differentially expressed transcript in bronchial biopsies between PE and IE. There were no differentially expressed genes in the other four compartments. There were higher expression scores for type 2, T-helper type-17 and type 1 pathway signatures together with those associated with viral infections in bronchial biopsies from FE compared to IE, while there were higher expression scores of type 2, type 1 and steroid insensitivity pathway signatures in bronchial biopsies of PFE compared to PIE. The FE group and its PFE subgroup are associated with poor asthma control while expressing higher type 1 and type 2 activation pathways compared to IE and PIE, respectively.

Sections du résumé

BACKGROUND
Exacerbation-prone asthma is a feature of severe disease. However, the basis for its persistency remains unclear.
OBJECTIVES
To determine the clinical and transcriptomic features of frequent exacerbators (FEs) and persistent FEs (PFEs) in the U-BIOPRED cohort.
METHODS
We compared features of FE (≥2 exacerbations in past year) to infrequent exacerbators (IE, <2 exacerbations) and of PFE with repeat ≥2 exacerbations during the following year to persistent IE (PIE). Transcriptomic data in blood, bronchial and nasal epithelial brushings, bronchial biopsies and sputum cells were analysed by gene set variation analysis for 103 gene signatures.
RESULTS
Of 317 patients, 62.4% had FE, of whom 63.6% had PFE, while 37.6% had IE, of whom 61.3% had PIE. Using multivariate analysis, FE was associated with short-acting beta-agonist use, sinusitis and daily oral corticosteroid use, while PFE was associated with eczema, short-acting beta-agonist use and asthma control index. CEA cell adhesion molecule 5 (CEACAM5) was the only differentially expressed transcript in bronchial biopsies between PE and IE. There were no differentially expressed genes in the other four compartments. There were higher expression scores for type 2, T-helper type-17 and type 1 pathway signatures together with those associated with viral infections in bronchial biopsies from FE compared to IE, while there were higher expression scores of type 2, type 1 and steroid insensitivity pathway signatures in bronchial biopsies of PFE compared to PIE.
CONCLUSION
The FE group and its PFE subgroup are associated with poor asthma control while expressing higher type 1 and type 2 activation pathways compared to IE and PIE, respectively.

Identifiants

pubmed: 35474304
doi: 10.1002/ctm2.816
pmc: PMC9043117
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e816

Commentaires et corrections

Type : CommentIn
Type : CommentIn

Informations de copyright

© 2022 The Authors. Clinical and Translational Medicine published by John Wiley & Sons Australia, Ltd on behalf of Shanghai Institute of Clinical Bioinformatics.

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Auteurs

Uruj Hoda (U)

National Heart and Lung Institute, Imperial College London, and Biomedical Research Unit, Royal Brompton and Harefield NHS Trust, London, UK.

Stelios Pavlidis (S)

Department of Computing & Data Science Institute, Imperial College London.

Aruna T Bansal (AT)

Acclarogen, Cambridge, UK.

Kentaro Takahashi (K)

National Heart and Lung Institute, Imperial College London, and Biomedical Research Unit, Royal Brompton and Harefield NHS Trust, London, UK.
Research Centre for Allergy and Clinical Immunology, Asahi General Hospital, Asahi, Japan.

Sile Hu (S)

Acclarogen, Cambridge, UK.

Francois Ng Kee Kwong (F)

National Heart and Lung Institute, Imperial College London, and Biomedical Research Unit, Royal Brompton and Harefield NHS Trust, London, UK.

Christos Rossios (C)

National Heart and Lung Institute, Imperial College London, and Biomedical Research Unit, Royal Brompton and Harefield NHS Trust, London, UK.

Kai Sun (K)

Acclarogen, Cambridge, UK.

Pankaj Bhavsar (P)

National Heart and Lung Institute, Imperial College London, and Biomedical Research Unit, Royal Brompton and Harefield NHS Trust, London, UK.

Matthew Loza (M)

Janssen Research and Development, High Wycombe, Buckinghamshire, UK.

Frederic Baribaud (F)

Janssen Research and Development, High Wycombe, Buckinghamshire, UK.

Pascal Chanez (P)

Assistance Publique des Hôpitaux de Marseille, Clinique des Bronches, Allergies et Sommeil, Aix Marseille Université, Marseille, France.

Stephen J Fowler (SJ)

Division of Infection, Immunity and Respiratory Medicine, Faculty of Biology, School of Biological Sciences, Medicine and Health, University of Manchester, Manchester Academic Health Science Centre, and NIHR Biomedical Research Centre, Manchester University Hospitals NHS Foundation Trust, Manchester, UK.

Ildiko Horvath (I)

Department of Pulmonology, Semmelweis University, Budapest, Hungary.

Paolo Montuschi (P)

Catholic University of Sacred Heart, Rome, Italy.

Florian Singer (F)

Department of Respiratory Medicine, University Children's Hospital Zurich and Childhood Research Center, Zurich, and Department of Paediatrics, Inselspital, University of Bern, Switzerland.

Jacek Musial (J)

Department of Medicine, Jagiellonian University Medical College, Krakow, Poland.

Barbro Dahlen (B)

Centre for Allergy Research, Karolinska Institutet, Stockholm, Sweden.

Norbert Krug (N)

Fraunhofer Institute for Toxicology and Experimental Medicine, Hannover, Germany.

Thomas Sandstrom (T)

Department of Public Health and Clinical Medicine, Umeå University, Umeå, Sweden.

Dominic E Shaw (DE)

Respiratory Research Unit, University of Nottingham, UK.

Rene Lutter (R)

Academic Medical Centre, University of Amsterdam, Amsterdam, The Netherlands.

Louise J Fleming (LJ)

National Heart and Lung Institute, Imperial College London, and Biomedical Research Unit, Royal Brompton and Harefield NHS Trust, London, UK.

Peter H Howarth (PH)

NIHR Southampton Biomedical Research Centre, Clinical and Experimental Sciences, Faculty of Medicine, University of Southampton, UK.

Massimo Caruso (M)

Department of Biochemical and Biotechnological Medicine, University of Catania, Catania, Italy.

Ana R Sousa (AR)

Respiratory Therapeutic Unit, GSK, Stockley Park, UK.

Julie Corfield (J)

AstraZeneca R&D, Molndal, Sweden, and Areteva R&D, Nottingham, UK.

Charles Auffray (C)

European Institute for Systems Biology and Medicine, CNRS-ENS-UCBL-INSERM, Lyon, France.

Bertrand De Meulder (B)

European Institute for Systems Biology and Medicine, CNRS-ENS-UCBL-INSERM, Lyon, France.

Diane Lefaudeux (D)

European Institute for Systems Biology and Medicine, CNRS-ENS-UCBL-INSERM, Lyon, France.

Sven-Erik Dahlen (SE)

Centre for Allergy Research, Karolinska Institutet, Stockholm, Sweden.

Ratko Djukanovic (R)

NIHR Southampton Biomedical Research Centre, Clinical and Experimental Sciences, Faculty of Medicine, University of Southampton, UK.

Peter J Sterk (PJ)

Academic Medical Centre, University of Amsterdam, Amsterdam, The Netherlands.

Yike Guo (Y)

Acclarogen, Cambridge, UK.

Ian M Adcock (IM)

National Heart and Lung Institute, Imperial College London, and Biomedical Research Unit, Royal Brompton and Harefield NHS Trust, London, UK.

Kian Fan Chung (KF)

National Heart and Lung Institute, Imperial College London, and Biomedical Research Unit, Royal Brompton and Harefield NHS Trust, London, UK.

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