Reduced adhesion of aged intestinal stem cells contributes to an accelerated clonal drift.


Journal

Life science alliance
ISSN: 2575-1077
Titre abrégé: Life Sci Alliance
Pays: United States
ID NLM: 101728869

Informations de publication

Date de publication:
08 2022
Historique:
received: 14 02 2022
revised: 11 04 2022
accepted: 12 04 2022
entrez: 29 4 2022
pubmed: 30 4 2022
medline: 4 5 2022
Statut: epublish

Résumé

Upon aging, the function of the intestinal epithelium declines with a concomitant increase in aging-related diseases. ISCs play an important role in this process. It is known that ISC clonal dynamics follow a neutral drift model. However, it is not clear whether the drift model is still valid in aged ISCs. Tracking of clonal dynamics by clonal tracing revealed that aged crypts drift into monoclonality substantially faster than young ones. However, ISC tracing experiments, in vivo and ex vivo, implied a similar clonal expansion ability of both young and aged ISCs. Single-cell RNA sequencing for 1,920 high Lgr5 ISCs from young and aged mice revealed increased heterogeneity among subgroups of aged ISCs. Genes associated with cell adhesion were down-regulated in aged ISCs. ISCs of aged mice indeed show weaker adhesion to the matrix. Simulations applying a single cell-based model of the small intestinal crypt demonstrated an accelerated clonal drift at reduced adhesion strength, implying a central role for reduced adhesion for affecting clonal dynamics upon aging.

Identifiants

pubmed: 35487692
pii: 5/8/e202201408
doi: 10.26508/lsa.202201408
pmc: PMC9057243
pii:
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Informations de copyright

© 2022 Hageb et al.

Références

Nat Protoc. 2016 Sep;11(9):1650-67
pubmed: 27560171
Nature. 2020 Oct;586(7828):275-280
pubmed: 33029001
Proc Natl Acad Sci U S A. 2007 Jun 12;104(24):10158-63
pubmed: 17548814
J Cell Sci. 1998 Aug;111 ( Pt 16):2297-303
pubmed: 9683625
Trends Mol Med. 2016 Aug;22(8):701-712
pubmed: 27380967
J Pathol. 2001 Oct;195(3):285-92
pubmed: 11673824
Science. 2009 Oct 2;326(5949):153-6
pubmed: 19797664
J Cell Sci. 1994 Dec;107 ( Pt 12):3271-9
pubmed: 7535783
Nat Methods. 2015 Feb;12(2):115-21
pubmed: 25633503
Novartis Found Symp. 2001;235:66-79; discussion 79-84, 101-4
pubmed: 11280034
Nat Rev Mol Cell Biol. 2014 Jan;15(1):19-33
pubmed: 24326621
Nature. 2009 May 14;459(7244):262-5
pubmed: 19329995
Nature. 2015 Sep 10;525(7568):251-5
pubmed: 26287467
Cell. 2010 Oct 1;143(1):134-44
pubmed: 20887898
Cell. 2018 Nov 15;175(5):1307-1320.e22
pubmed: 30392957
Nature. 2014 Mar 20;507(7492):362-365
pubmed: 24531760
Nat Biotechnol. 2019 Aug;37(8):907-915
pubmed: 31375807
EMBO Rep. 2014 Jan;15(1):62-9
pubmed: 24355609
Nat Methods. 2012 Jun 28;9(7):676-82
pubmed: 22743772
Genome Biol. 2019 Sep 2;20(1):185
pubmed: 31477170
Cell Rep. 2017 Mar 14;18(11):2608-2621
pubmed: 28297666
Sci Rep. 2017 Mar 03;7:43249
pubmed: 28256524
Cell Stem Cell. 2018 May 3;22(5):769-778.e4
pubmed: 29727683
Cell Mol Gastroenterol Hepatol. 2017 Jan 25;3(3):389-409
pubmed: 28462380
EMBO J. 2012 Jun 12;31(14):3079-91
pubmed: 22692129
Bioinformatics. 2020 Apr 1;36(7):2189-2194
pubmed: 31782763
Genome Res. 2003 Nov;13(11):2498-504
pubmed: 14597658
Biophys J. 2005 Jan;88(1):62-75
pubmed: 15475585
Cell Stem Cell. 2013 Nov 7;13(5):626-33
pubmed: 24035355
Nature. 2019 Jul;571(7765):398-402
pubmed: 31292548
Nature. 2017 May 11;545(7653):238-242
pubmed: 28467820
Genome Biol. 2004;5(10):R80
pubmed: 15461798
Nat Commun. 2018 Mar 19;9(1):1132
pubmed: 29556067
PLoS Comput Biol. 2011 Jan 06;7(1):e1001045
pubmed: 21253562
Proc Natl Acad Sci U S A. 2005 Oct 25;102(43):15545-50
pubmed: 16199517
J Biol Chem. 2017 Sep 8;292(36):14989-15001
pubmed: 28739799
Front Biosci (Landmark Ed). 2012 Jan 01;17(2):784-804
pubmed: 22201774
iScience. 2021 Mar 26;24(4):102362
pubmed: 33870147
J R Soc Interface. 2016 Aug;13(121):
pubmed: 27534699
Annu Rev Physiol. 2020 Feb 10;82:203-226
pubmed: 31610128
Nature. 2007 Oct 25;449(7165):1003-7
pubmed: 17934449
Science. 2010 Nov 5;330(6005):822-5
pubmed: 20929733
Dev Biol. 2018 Jan 15;433(2):254-261
pubmed: 29198564
Gastroenterology. 2017 Sep;153(3):674-677.e3
pubmed: 28552620
Genome Res. 2021 Jun 8;:
pubmed: 34103331
Nature. 2017 Nov 16;551(7680):333-339
pubmed: 29144463
Proc Biol Sci. 1990 Jul 23;241(1300):13-8
pubmed: 1978330
Am J Physiol Gastrointest Liver Physiol. 2019 Jan 1;316(1):G64-G74
pubmed: 30359083
Nature. 2020 Sep;585(7826):574-578
pubmed: 32939089
Age (Dordr). 2014 Jun;36(3):9603
pubmed: 24352567

Auteurs

Ali Hageb (A)

Institute of Molecular Medicine, Ulm University, Ulm, Germany.

Torsten Thalheim (T)

Interdisciplinary Centre for Bioinformatics, University Leipzig, Leipzig, Germany.

Kalpana J Nattamai (KJ)

Division of Experimental Hematology and Cancer Biology, Cincinnati Children's Hospital Medical Center (CCHMC), Cincinnati, OH, USA.

Bettina Möhrle (B)

Institute of Molecular Medicine, Ulm University, Ulm, Germany.

Mehmet Saçma (M)

Institute of Molecular Medicine, Ulm University, Ulm, Germany.

Vadim Sakk (V)

Institute of Molecular Medicine, Ulm University, Ulm, Germany.

Lars Thielecke (L)

Institute for Medical Informatics and Biometry, Technische Universität Dresden, Dresden, Germany.

Kerstin Cornils (K)

Clinic of Pediatric Hematology and Oncology, Division of Pediatric Stem Cell Transplantation and Immunology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Research Institute Children's Cancer Center Hamburg, Hamburg, Germany.

Carolin Grandy (C)

Institute for Experimental Physics, Ulm University, Ulm, Germany.

Fabian Port (F)

Institute for Experimental Physics, Ulm University, Ulm, Germany.

Kay-E Gottschalk (KE)

Institute for Experimental Physics, Ulm University, Ulm, Germany.

Jan-Philipp Mallm (JP)

Division of Chromatin Networks, German Cancer Research Center (DKFZ), Heidelberg, Germany.

Ingmar Glauche (I)

Institute for Medical Informatics and Biometry, Technische Universität Dresden, Dresden, Germany.

Jörg Galle (J)

Interdisciplinary Centre for Bioinformatics, University Leipzig, Leipzig, Germany.

Medhanie A Mulaw (MA)

Central Unit Single Cell Sequencing, Medical Faculty, Ulm University, Ulm, Germany hartmut.geiger@uni-ulm.de Medhanie.Mulaw@uni-ulm.de.

Hartmut Geiger (H)

Institute of Molecular Medicine, Ulm University, Ulm, Germany hartmut.geiger@uni-ulm.de Medhanie.Mulaw@uni-ulm.de.

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Classifications MeSH