Quantifying cell-cycle-dependent chromatin dynamics during interphase by live 3D tracking.
Biological sciences
Biophysics
Chromosome organization
Optical imaging
Journal
iScience
ISSN: 2589-0042
Titre abrégé: iScience
Pays: United States
ID NLM: 101724038
Informations de publication
Date de publication:
20 May 2022
20 May 2022
Historique:
received:
10
10
2021
revised:
02
02
2022
accepted:
31
03
2022
entrez:
2
5
2022
pubmed:
3
5
2022
medline:
3
5
2022
Statut:
epublish
Résumé
The study of cell cycle progression and regulation is important to our understanding of fundamental biophysics, aging, and disease mechanisms. Local chromatin movements are generally considered to be constrained and relatively consistent during all interphase stages, although recent advances in our understanding of genome organization challenge this claim. Here, we use high spatiotemporal resolution, 4D (x, y, z and time) localization microscopy by point-spread-function (PSF) engineering and deep learning-based image analysis, for live imaging of
Identifiants
pubmed: 35494233
doi: 10.1016/j.isci.2022.104197
pii: S2589-0042(22)00467-9
pmc: PMC9051635
doi:
Types de publication
Journal Article
Langues
eng
Pagination
104197Informations de copyright
© 2022 The Author(s).
Déclaration de conflit d'intérêts
The authors declare no competing interests.
Références
Science. 2015 Feb 27;347(6225):1017-21
pubmed: 25722416
Nature. 2017 Jul 13;547(7662):241-245
pubmed: 28636597
Genes Chromosomes Cancer. 2019 Jul;58(7):437-451
pubmed: 30537111
Proc Natl Acad Sci U S A. 2018 Oct 23;115(43):10977-10982
pubmed: 30297429
Cell. 2019 Oct 3;179(2):470-484.e21
pubmed: 31543265
Cell. 2019 Jan 24;176(3):520-534.e25
pubmed: 30661750
J Cell Biol. 2003 Mar 3;160(5):685-97
pubmed: 12604593
Science. 2018 Oct 26;362(6413):
pubmed: 30361340
PLoS One. 2007 Sep 26;2(9):e963
pubmed: 17896003
J Cell Sci. 2008 Dec 15;121(Pt 24):4018-28
pubmed: 19056671
Chromosome Res. 2006;14(7):707-33
pubmed: 17115328
J Chem Phys. 2021 Jul 7;155(1):010901
pubmed: 34241389
Mol Cell. 2017 Jul 20;67(2):282-293.e7
pubmed: 28712725
Mol Cell Biol. 1999 Apr;19(4):2690-8
pubmed: 10082535
PLoS Genet. 2020 Mar 23;16(3):e1008673
pubmed: 32203508
Science. 2009 Oct 9;326(5950):289-93
pubmed: 19815776
Nat Cell Biol. 2021 Feb;23(2):116-126
pubmed: 33558730
Phys Rev E Stat Nonlin Soft Matter Phys. 2013 May;87(5):052713
pubmed: 23767572
PLoS One. 2018 Feb 12;13(2):e0192087
pubmed: 29432467
Nature. 2019 Nov;575(7782):390-394
pubmed: 31618757
Nat Rev Mol Cell Biol. 2017 May;18(5):285-298
pubmed: 28225081
EMBO J. 2012 Apr 4;31(7):1644-53
pubmed: 22343941
Curr Biol. 2006 Apr 18;16(8):825-31
pubmed: 16631592
Proc Natl Acad Sci U S A. 2015 Nov 24;112(47):E6456-65
pubmed: 26499245
J Cell Biol. 2019 May 6;218(5):1467-1477
pubmed: 30846483
Mol Cell Biol. 2006 Jul;26(14):5360-72
pubmed: 16809772
Nature. 2017 Jul 5;547(7661):61-67
pubmed: 28682332
Nat Methods. 2020 Jul;17(7):734-740
pubmed: 32541853
Dev Cell. 2019 Jun 17;49(6):920-935.e5
pubmed: 31105008
Genome Biol. 2020 Apr 20;21(1):95
pubmed: 32312289
Mol Cell Biol. 1998 Feb;18(2):1055-64
pubmed: 9448003
Proc Natl Acad Sci U S A. 2009 Mar 31;106(13):5159-64
pubmed: 19289837
Proc Natl Acad Sci U S A. 2004 Jun 29;101(26):9677-82
pubmed: 15210943
Proc Natl Acad Sci U S A. 2009 Mar 3;106(9):2995-9
pubmed: 19211795
Nano Lett. 2015 Jun 10;15(6):4194-9
pubmed: 25939423
Biophys J. 2005 Dec;89(6):4275-85
pubmed: 16150965
Science. 2006 May 19;312(5776):1059-63
pubmed: 16645051
Biomed Opt Express. 2017 Nov 21;8(12):5735-5748
pubmed: 29296501
Science. 2018 Sep 28;361(6409):1341-1345
pubmed: 30262496
J Phys Chem B. 2014 Jul 17;118(28):8313-29
pubmed: 24745862
Cell Cycle. 2009 Apr 1;8(7):1044-52
pubmed: 19270522
Proc Natl Acad Sci U S A. 2019 Oct 1;116(40):19939-19944
pubmed: 31527274
Cell Rep. 2019 Jan 2;26(1):18-28.e5
pubmed: 30605674
Proc Natl Acad Sci U S A. 2007 Mar 20;104(12):4955-60
pubmed: 17360326
Opt Express. 2020 Mar 30;28(7):10179-10198
pubmed: 32225609
Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Jun;85(6 Pt 1):061916
pubmed: 23005136
J Cell Biol. 1999 Nov 29;147(5):913-20
pubmed: 10579712
Proc Natl Acad Sci U S A. 2008 Dec 16;105(50):19732-7
pubmed: 19064912
Exp Cell Res. 2008 Jan 1;314(1):82-91
pubmed: 17870066
Nat Genet. 2021 Jan;53(1):100-109
pubmed: 33318687
Phys Rev Lett. 2009 Jul 3;103(1):018102
pubmed: 19659180
Genome Biol. 2018 Nov 7;19(1):189
pubmed: 30404662
Biochem Soc Trans. 2018 Jun 19;46(3):729-740
pubmed: 29871877
Cytometry. 1996 Sep 1;25(1):1-13
pubmed: 8875049
Cell. 2015 Mar 12;160(6):1145-58
pubmed: 25768910
Cell. 2015 Jul 2;162(1):108-19
pubmed: 26119342
Curr Opin Genet Dev. 2014 Jun;26:41-6
pubmed: 25005744
Science. 2013 Aug 9;341(6146):664-7
pubmed: 23828889
Cell. 2015 Aug 13;162(4):911-23
pubmed: 26276637
Cell. 2012 Jul 20;150(2):317-26
pubmed: 22817894
Nat Genet. 2020 Dec;52(12):1397-1411
pubmed: 33169020
Cancer Sci. 2012 Aug;103(8):1460-6
pubmed: 22497681
Chem Rev. 2017 Jun 14;117(11):7244-7275
pubmed: 28151646
PLoS One. 2015 Feb 13;10(2):e0117722
pubmed: 25680069
J Biosci. 2020;45:
pubmed: 31965994
Nat Commun. 2015 Aug 24;6:8044
pubmed: 26299252
Curr Opin Cell Biol. 2020 Jun;64:77-89
pubmed: 32283330