Construction and Characterization of HIV-1 env-Pseudoviruses of the Recombinant Form CRF63_02A and Subtype A6.
A6
CRF63_02A
broadly neutralizing antibodies (bnAbs)
env-pseudoviruses
virus neutralization assay
Journal
Bulletin of experimental biology and medicine
ISSN: 1573-8221
Titre abrégé: Bull Exp Biol Med
Pays: United States
ID NLM: 0372557
Informations de publication
Date de publication:
Apr 2022
Apr 2022
Historique:
received:
12
10
2021
pubmed:
3
5
2022
medline:
20
5
2022
entrez:
2
5
2022
Statut:
ppublish
Résumé
HIV-1 env-pseudoviruses are a useful tool in the search for antiviral drugs (entry inhibitors) and evaluation of the efficacy of HIV-1 vaccines. Given the high genetic variability of HIV-1, it is necessary to regularly update the panels of pseudoviruses in accordance with the emergence of new strains. Based on genetic variants of HIV-1 circulating in the regions of the Siberian Federal District, 13 HIV-1 env-pseudoviruses of recombinant form CRF63_02A and subtype A6 were obtained. Most pseudoviruses have been shown to be sensitive to neutralization by bnAbs VRC01, PGT126, and 10E8, moderately sensitive to bnAbs PG9 and 4E10, and resistant to bnAbs 2G12, PG16, and 2F5. All obtained variants of pseudoviruses are CCR5-tropic.
Identifiants
pubmed: 35501651
doi: 10.1007/s10517-022-05466-7
pii: 10.1007/s10517-022-05466-7
doi:
Substances chimiques
Antibodies, Neutralizing
0
Broadly Neutralizing Antibodies
0
HIV Antibodies
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
729-733Informations de copyright
© 2022. Springer Science+Business Media, LLC, part of Springer Nature.
Références
Baryshev PB, Bogachev VV, Gashnikova NM. HIV-1 genetic diversity in Russia: CRF63_02A1, a new HIV type 1 genetic variant spreading in Siberia. AIDS Res. Hum. Retroviruses. 2014;30(6):592-597. https://doi.org/10.1089/aid.2013.019
doi: 10.1089/aid.2013.019
pubmed: 24279614
pmcid: 4046202
Chong H, Hong K, Zhang C, Nie J, Song A, Kong W, Wang Y. Genetic and neutralization properties of HIV-1 env clones from subtype B/BC/AE infections in China. J. Acquir. Immune Defic. Syndr. 2008;47(5):535-543. https://doi.org/10.1097/QAI.0b013e3181663967
doi: 10.1097/QAI.0b013e3181663967
pubmed: 18209676
Hraber P, Rademeyer C, Williamson C, Seaman MS, Gottardo R, Tang H, Greene K, Gao H, LaBranche C, Mascola JR, Morris L, Montefiori DC, Korber B. Panels of HIV-1 subtype C Env reference strains for standardized neutralization assessments. J. Virol. 2017;91(19):e00991-17. https://doi.org/10.1128/JVI.00991-17
doi: 10.1128/JVI.00991-17
pubmed: 28747500
pmcid: 5599761
Lebedev A, Lebedeva N, Moskaleychik F, Pronin A, Kazennova E, Bobkova M. Human Immunodeficiency Virus-1 diversity in the Moscow Region, Russia: phylodynamics of the most common subtypes. Front. Microbiol. 2019;10:320. https://doi.org/10.3389/fmicb.2019.00320
doi: 10.3389/fmicb.2019.00320
pubmed: 30863382
pmcid: 6399469
Li M, Gao F, Mascola J.R, Stamatatos L, Polonis VR, Koutsoukos M, Voss G, Goepfert P, Gilbert P, Greene KM, Bilska M, Kothe DL, Salazar-Gonzalez JF, Wei X, Decker JM, Hahn BH, Montefiori DC. Human immunodeficiency virus type 1 env clones from acute and early subtype B infections for standardized assessments of vaccine-elicited neutralizing antibodies. J. Virol. 2005;79(16):10108-10125. https://doi.org/10.1128/JVI.79.16.10108-10125.2005
doi: 10.1128/JVI.79.16.10108-10125.2005
pubmed: 16051804
pmcid: 1182643
Li Q, Liu Q, Huang W, Li X, Wang Y. Current status on the development of pseudoviruses for enveloped viruses. Rev. Med. Virol. 2018;28(1):e1963. https://doi.org/10.1002/rmv.1963
doi: 10.1002/rmv.1963
Montefiori DC, Roederer M, Morris L, Seaman MS. Neutralization tiers of HIV-1. Curr. Opin. HIV AIDS. 2018;13(2):128-136. https://doi.org/10.1097/COH.0000000000000442
doi: 10.1097/COH.0000000000000442
pubmed: 29266013
pmcid: 5802254
Nadai Y, Eyzaguirre LM, Constantine NT, Sill AM, Cleghorn F, Blattner WA, Carr JK. Protocol for nearly full-length sequencing of HIV-1 RNA from plasma. PLoS One. 2008;3(1):e1420. https://doi.org/10.1371/journal.pone.0001420
doi: 10.1371/journal.pone.0001420
pubmed: 18183300
pmcid: 2170516
Nie J, Huang W, Liu Q, Wang Y. HIV-1 pseudoviruses constructed in China regulatory laboratory. Emerg. Microbes Infect. 2019;9(1):32-41. https://doi.org/10.1080/22221751.2019.1702479
doi: 10.1080/22221751.2019.1702479
pubmed: 31859609
pmcid: 6968579
Nie J, Zhang C, Liu W, Wu X, Li F, Wang S, Liang F, Song A, Wang Y. Genotypic and phenotypic characterization of HIV-1 CRF01_AE env molecular clones from infections in China. J. Acquir. Immune Defic. Syndr. 2010;53(4):440-450. https://doi.org/10.1097/QAI.0b013e3181cb8300
doi: 10.1097/QAI.0b013e3181cb8300
pubmed: 20090544
Revilla A, Delgado E, Christian E.C, Dalrymple J, Vega Y, Carrera C, González-Galeano M, Ocampo A, de Castro R.O, Lezaún MJ, Rodríguez R, Mariño A, Ordóñez P, Cilla G, Cisterna R, Santamaría JM, Prieto S, Rakhmanova A, Vinogradova A, Ríos M, Pérez-Álvarez L, Nájera R, Montefiori DC, Seaman MS, Thomson MM. Construction and phenotypic characterization of HIV type 1 functional envelope clones of subtypes G and F. AIDS Res. Hum. Retroviruses. 2011;27(8):889-901. https://doi.org/10.1089/AID.2010.0177
doi: 10.1089/AID.2010.0177
pubmed: 21226626
Shang H, Han X, Shi X, Zuo T, Goldin M, Chen D, Han B, Sun W, Wu H, Wang X, Zhang L. Genetic and neutralization sensitivity of diverse HIV-1 env clones from chronically infected patients in China. J. Biol. Chem. 2011;286(16):14 531-14 541. https://doi.org/10.1074/jbc.M111.224527
Shcherbakova NS, Shalamova LA, Delgado E, Fernández-García A, Vega Y, Karpenko LI, Ilyichev AA, Sokolov YV, Shcherbakov DN, Pérez-Álvarez L, Thomson MM. Short communication: molecular epidemiology, phylogeny, and phylodynamics of CRF63_02A1, a recently originated HIV-1 circulating recombinant form spreading in Siberia. AIDS Res. Hum. Retroviruses. 2014;30(9):912-919. https://doi.org/10.1089/AID.2014.0075
doi: 10.1089/AID.2014.0075
pubmed: 25050828
pmcid: 4151068
Stefic K, Bouvin-Pley M, Essat A, Visdeloup C, Moreau A, Goujard C, Chaix ML, Braibant M, Meyer L, Barin F. Sensitivity to broadly neutralizing antibodies of recently transmitted HIV-1 clade CRF02_AG viruses with a focus on evolution over time. J. Virol. 2019;93(2):e01492-18. https://doi.org/10.1128/JVI.01492-18
doi: 10.1128/JVI.01492-18
pubmed: 30404804
pmcid: 6321924