Longitudinal and Comparative Analysis of Gut Microbiota of Tunisian Newborns According to Delivery Mode.

ESKAPE bacteria Tunisia elective cesarean deliveries microbiome newborns shotgun metagenome sequencing

Journal

Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977

Informations de publication

Date de publication:
2022
Historique:
received: 21 09 2021
accepted: 15 03 2022
entrez: 13 5 2022
pubmed: 14 5 2022
medline: 14 5 2022
Statut: epublish

Résumé

Microbiota colonization is a dynamic process that impacts the health status during an individual's lifetime. The composition of the gut microbiota of newborns is conditioned by multiple factors, including the delivery mode (DM). Nonetheless, the DM's influence remains uncertain and is still the subject of debate. In this context, the medical indication and the emergency of a cesarean delivery might have led to confounding conclusions regarding the composition and diversity of the neonatal microbiome. Herein, we used high-resolution shotgun sequencing to decipher the composition and dynamics of the gut microbiota composition of Tunisian newborns. Stool samples were collected from 5 elective cesarean section (ECS) and 5 vaginally delivered (VD) newborns at the following time points: Day 0, Day 15, and Day 30. The ECS and VD newborns showed the same level of bacterial richness and diversity. In addition, our data pointed to a shift in microbiota community composition during the first 2 weeks, regardless of the DM. Both ECS and VD showed a profile dominated by Proteobacteria, Actinobacteria, and Firmicutes. However, ECS showed an underrepresentation of

Identifiants

pubmed: 35547149
doi: 10.3389/fmicb.2022.780568
pmc: PMC9083410
doi:

Types de publication

Journal Article

Langues

eng

Pagination

780568

Informations de copyright

Copyright © 2022 Hanachi, Maghrebi, Bichiou, Trabelsi, Bouyahia, Zhioua, Belghith, Harigua-Souiai, Baouendi, Guizani-Tabbane, Benkahla and Souiai.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

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Auteurs

Mariem Hanachi (M)

Laboratory of Bioinformatics, bioMathematics and Biostatistics-LR16IPT09, Institut Pasteur de Tunis, Université de Tunis El Manar, Tunis, Tunisia.
Faculty of Science of Bizerte, University of Carthage, Tunis, Tunisia.

Olfa Maghrebi (O)

Laboratory of Transmission, Control, and Immunobiology of Infections-LR16 IPT02, Institut Pasteur de Tunis, Université de Tunis El Manar, Tunis, Tunisia.

Haifa Bichiou (H)

Laboratory of Medical Parasitology, Biotechnology, and Biomolecules-LR16 IPT06, Institut Pasteur de Tunis, Université de Tunis El Manar, Tunis, Tunisia.

Ferdaous Trabelsi (F)

Service de Gynécologie et Obstétrique, Hôpital Régional de Zaghouan, Zaghouan, Tunisia.

Najla Maha Bouyahia (NM)

Service de Gynécologie Obstétrique et Médecine de la Reproduction, Hôpital Aziza Othmana, Tunis, Tunisia.

Fethi Zhioua (F)

Service de Gynécologie Obstétrique et Médecine de la Reproduction, Hôpital Aziza Othmana, Tunis, Tunisia.

Meriam Belghith (M)

Laboratory of Transmission, Control, and Immunobiology of Infections-LR16 IPT02, Institut Pasteur de Tunis, Université de Tunis El Manar, Tunis, Tunisia.

Emna Harigua-Souiai (E)

Laboratory of Molecular Epidemiology and Experimental Pathology-LR16IPT04, Institut Pasteur de Tunis, Université de Tunis El Manar, Tunis, Tunisia.

Meriem Baouendi (M)

Laboratory of Bioinformatics, bioMathematics and Biostatistics-LR16IPT09, Institut Pasteur de Tunis, Université de Tunis El Manar, Tunis, Tunisia.

Lamia Guizani-Tabbane (L)

Laboratory of Medical Parasitology, Biotechnology, and Biomolecules-LR16 IPT06, Institut Pasteur de Tunis, Université de Tunis El Manar, Tunis, Tunisia.

Alia Benkahla (A)

Laboratory of Bioinformatics, bioMathematics and Biostatistics-LR16IPT09, Institut Pasteur de Tunis, Université de Tunis El Manar, Tunis, Tunisia.

Oussema Souiai (O)

Laboratory of Bioinformatics, bioMathematics and Biostatistics-LR16IPT09, Institut Pasteur de Tunis, Université de Tunis El Manar, Tunis, Tunisia.

Classifications MeSH