HIV-associated vaginal microbiome and inflammation predict spontaneous preterm birth in Zambia.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
20 05 2022
Historique:
received: 25 01 2022
accepted: 26 04 2022
entrez: 20 5 2022
pubmed: 21 5 2022
medline: 25 5 2022
Statut: epublish

Résumé

A Lactobacillus-deficient, anaerobe-rich vaginal microbiome has been associated with local inflammation and spontaneous preterm birth (sPTB), but few studies have assessed this association in the setting of HIV. We performed metagenomic sequencing and inflammatory marker assays on vaginal swabs collected in pregnancy. We grouped samples into 7 metagenomic clusters (mgClust) using the non-redundant VIRGO catalogue, and derived inflammatory scores by factor analysis. Of 221 participants, median Shannon diversity index (SDI) was highest in HIV+ with detectable viral load (1.31, IQR: 0.85-1.66; p < 0.001) and HIV+ with undetectable virus (1.17, IQR: 0.51-1.66; p = 0.01) compared to HIV- (0.74, IQR: 0.35-1.26). Inflammatory scores positively correlated with SDI (+ 0.66, 95%CI 0.28, 1.03; p = 0.001), highest among anaerobe-rich mgClust2-mgClust6. HIV was associated with predominance of anaerobe-rich mgClust5 (17% vs. 6%; p = 0.02) and mgClust6 (27% vs. 11%; p = 0.002). Relative abundance of a novel Gardnerella metagenomic subspecies > 50% predicted sPTB (RR 2.6; 95%CI: 1.1, 6.4) and was higher in HIV+ (23% vs. 10%; p = 0.001). A novel Gardnerella metagenomic subspecies more abundant in women with HIV predicted sPTB. The risk of sPTB among women with HIV may be mediated by the vaginal microbiome and inflammation, suggesting potential targets for prevention.

Identifiants

pubmed: 35595739
doi: 10.1038/s41598-022-12424-w
pii: 10.1038/s41598-022-12424-w
pmc: PMC9123167
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

8573

Subventions

Organisme : FIC NIH HHS
ID : K01 TW010857
Pays : United States
Organisme : NIH HHS
ID : P30 AI50410; T32 HD075731; K01 TW010857; D43 TW009340; R21DK123674; R01HL148672
Pays : United States
Organisme : Bill & Melinda Gates Foundation
ID : OPP1033514
Pays : United States
Organisme : The Gerber Foundation
ID : 6361
Pays : United States
Organisme : Bill & Melinda Gates Foundation
ID : OPP1189217
Pays : United States

Informations de copyright

© 2022. The Author(s).

Références

J Microbiol Methods. 2011 Jul;86(1):42-51
pubmed: 21457733
Bioinformatics. 2014 Aug 1;30(15):2114-20
pubmed: 24695404
Appl Environ Microbiol. 2018 Mar 1;84(6):
pubmed: 29305501
Proc Natl Acad Sci U S A. 2011 Mar 15;108 Suppl 1:4680-7
pubmed: 20534435
Immunity. 2015 May 19;42(5):965-76
pubmed: 25992865
J Acquir Immune Defic Syndr. 2015 Nov 1;70(3):289-95
pubmed: 26186507
AIDS. 2021 Mar 15;35(4):555-565
pubmed: 33394679
Nat Commun. 2019 Mar 21;10(1):1305
pubmed: 30899005
Genome Biol. 2022 Mar 1;23(1):66
pubmed: 35232471
Stat Med. 2012 Oct 15;31(23):2676-86
pubmed: 22307964
J Infect Dis. 2016 Jul 1;214(1):55-64
pubmed: 26917574
Microbiome. 2014 May 27;2:18
pubmed: 24987521
Genome Biol. 2009;10(3):R25
pubmed: 19261174
Bioinformatics. 2012 Dec 15;28(24):3211-7
pubmed: 23071270
Nat Commun. 2020 Feb 26;11(1):940
pubmed: 32103005
AIDS. 2007 Sep 12;21(14):1899-907
pubmed: 17721097
Lancet HIV. 2017 Jan;4(1):e21-e30
pubmed: 27864000
Lancet HIV. 2016 Jan;3(1):e33-48
pubmed: 26762992
Nat Med. 2019 Jun;25(6):1012-1021
pubmed: 31142849
Lancet. 2012 Jun 9;379(9832):2162-72
pubmed: 22682464
J Infect Dis. 2007 Nov 1;196(9):1355-60
pubmed: 17922400
J Infect Dis. 2020 Mar 16;221(7):1194-1203
pubmed: 31722395
J Acquir Immune Defic Syndr Hum Retrovirol. 1999 Jan 1;20(1):52-9
pubmed: 9928730
Proc Natl Acad Sci U S A. 2017 Sep 12;114(37):9966-9971
pubmed: 28847941
Am J Epidemiol. 2004 Apr 1;159(7):702-6
pubmed: 15033648
Birth. 2021 Mar;48(1):139-146
pubmed: 33462893
Infect Immun. 2017 Dec 19;86(1):
pubmed: 29038128
J Acquir Immune Defic Syndr. 2021 Jun 1;87(2):860-868
pubmed: 33587508
Gates Open Res. 2018 Dec 4;2:25
pubmed: 30706053
Front Cell Infect Microbiol. 2021 Feb 11;10:596917
pubmed: 33643930
Antimicrob Agents Chemother. 2015 Oct;59(10):6395-401
pubmed: 26239974
Microbiology (Reading). 2014 Oct;160(Pt 10):2272-2282
pubmed: 25073854
Int J Syst Evol Microbiol. 2019 Mar;69(3):679-687
pubmed: 30648938
BMC Med Res Methodol. 2003 Oct 20;3:21
pubmed: 14567763
Front Cell Infect Microbiol. 2020 Mar 31;10:117
pubmed: 32296647
Proc Natl Acad Sci U S A. 2015 Sep 1;112(35):11060-5
pubmed: 26283357
Appl Environ Microbiol. 2015 Aug;81(15):4965-75
pubmed: 25979893
PLoS One. 2019 Oct 2;14(10):e0223128
pubmed: 31577818

Auteurs

Joan T Price (JT)

Department of Obstetrics and Gynaecology, University of Zambia School of Medicine, Lusaka, Zambia. joan_price@med.unc.edu.
Department of Obstetrics and Gynecology, University of North Carolina at Chapel Hill, 101 Manning Drive, Chapel Hill, NC, 27514, USA. joan_price@med.unc.edu.
UNC Global Projects-Zambia, Lusaka, Zambia. joan_price@med.unc.edu.

Bellington Vwalika (B)

Department of Obstetrics and Gynaecology, University of Zambia School of Medicine, Lusaka, Zambia.

Michael France (M)

Institute for Genome Sciences, Department of Immunology and Microbiology, University of Maryland, Baltimore, MD, USA.

Jacques Ravel (J)

Institute for Genome Sciences, Department of Immunology and Microbiology, University of Maryland, Baltimore, MD, USA.

Bing Ma (B)

Institute for Genome Sciences, Department of Immunology and Microbiology, University of Maryland, Baltimore, MD, USA.

Humphrey Mwape (H)

UNC Global Projects-Zambia, Lusaka, Zambia.

Katelyn J Rittenhouse (KJ)

Department of Obstetrics and Gynecology, University of North Carolina at Chapel Hill, 101 Manning Drive, Chapel Hill, NC, 27514, USA.

Kristina De Paris (K)

Department of Microbiology and Immunology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.

Marcia Hobbs (M)

Department of Microbiology and Immunology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.

Julie A Nelson (JA)

Department of Microbiology and Immunology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.

Margaret P Kasaro (MP)

Department of Obstetrics and Gynaecology, University of Zambia School of Medicine, Lusaka, Zambia.
UNC Global Projects-Zambia, Lusaka, Zambia.

Elizabeth M Stringer (EM)

Department of Obstetrics and Gynecology, University of North Carolina at Chapel Hill, 101 Manning Drive, Chapel Hill, NC, 27514, USA.

Jeffrey S A Stringer (JSA)

Department of Obstetrics and Gynecology, University of North Carolina at Chapel Hill, 101 Manning Drive, Chapel Hill, NC, 27514, USA.

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