Trio-binned genomes of the woodrats Neotoma bryanti and Neotoma lepida reveal novel gene islands and rapid copy number evolution of xenobiotic metabolizing genes.
adaptive evolution
dietary adaptation
functional genomics
genome sequencing
metabolic adaptation
xenobiotic metabolism
Journal
Molecular ecology resources
ISSN: 1755-0998
Titre abrégé: Mol Ecol Resour
Pays: England
ID NLM: 101465604
Informations de publication
Date de publication:
Oct 2022
Oct 2022
Historique:
revised:
05
04
2022
received:
23
12
2021
accepted:
11
05
2022
pubmed:
24
5
2022
medline:
8
9
2022
entrez:
23
5
2022
Statut:
ppublish
Résumé
The genomic architecture underlying the origins and maintenance of biodiversity is an increasingly accessible feature of species, due in large part to third-generation sequencing and novel analytical toolsets. Applying these techniques to woodrats (Neotoma spp.) provides a unique opportunity to study how herbivores respond to environmental change. Neotoma bryanti and N. lepida independently achieved a major dietary feat in the aftermath of a natural climate change event: switching to the novel, toxic food source creosote bush (Larrea tridentata). To better understand the genetic mechanisms underlying this ability, we employed a trio binning sequencing approach with a N. bryanti × N. lepida F
Identifiants
pubmed: 35599377
doi: 10.1111/1755-0998.13650
doi:
Substances chimiques
Xenobiotics
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
2713-2731Subventions
Organisme : National Science Foundation
ID : IOS-1457209
Organisme : National Science Foundation
ID : IOS-1656497
Organisme : National Science Foundation
ID : OIA-1826801
Informations de copyright
© 2022 John Wiley & Sons Ltd.
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