Comparative Genomic Analysis Revealed Distinct Molecular Components and Organization of CO

CO2-concentrating mechanisms (CCMs) Rubisco carboxysomes inorganic carbon uptake photosynthesis thermophilic cyanobacteria

Journal

Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977

Informations de publication

Date de publication:
2022
Historique:
received: 15 02 2022
accepted: 04 04 2022
entrez: 23 5 2022
pubmed: 24 5 2022
medline: 24 5 2022
Statut: epublish

Résumé

Cyanobacteria evolved an inorganic carbon-concentrating mechanism (CCM) to perform effective oxygenic photosynthesis and prevent photorespiratory carbon losses. This process facilitates the acclimation of cyanobacteria to various habitats, particularly in CO

Identifiants

pubmed: 35602029
doi: 10.3389/fmicb.2022.876272
pmc: PMC9120777
doi:

Types de publication

Journal Article

Langues

eng

Pagination

876272

Informations de copyright

Copyright © 2022 Tang, Zhou, Yao, Riaz, You, Klepacz-Smółka and Daroch.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Références

Nat Commun. 2018 Nov 30;9(1):5114
pubmed: 30504855
Life (Basel). 2015 Jan 28;5(1):348-71
pubmed: 25636131
Plant Cell Physiol. 1995 Mar;36(2):207-13
pubmed: 7767600
Front Microbiol. 2021 Sep 10;12:696102
pubmed: 34566907
New Phytol. 2016 Mar;209(4):1417-27
pubmed: 26529678
Comput Struct Biotechnol J. 2017 May 25;15:340-350
pubmed: 28652895
J Exp Bot. 2017 Jun 1;68(14):3869-3877
pubmed: 28911053
J Exp Bot. 2016 Sep;67(17):5067-91
pubmed: 27406782
PLoS One. 2014 Oct 23;9(10):e109738
pubmed: 25340743
Front Microbiol. 2022 Jan 28;12:739625
pubmed: 35154020
Funct Plant Biol. 2002 Apr;29(3):151-159
pubmed: 32689462
PLoS One. 2012;7(8):e43871
pubmed: 22928045
Bioinformatics. 2009 Jul 15;25(14):1754-60
pubmed: 19451168
Bioresour Technol. 2019 Apr;278:255-265
pubmed: 30708328
New Phytol. 2019 Apr;222(1):206-217
pubmed: 30383301
ISME J. 2021 Jan;15(1):211-227
pubmed: 32943748
PLoS One. 2009 Oct 21;4(10):e7521
pubmed: 19844578
ISME J. 2007 Dec;1(8):703-13
pubmed: 18059494
Gigascience. 2012 Dec 27;1(1):18
pubmed: 23587118
Int J Mol Sci. 2019 Jan 03;20(1):
pubmed: 30609821
Photosynth Res. 2011 Sep;109(1-3):47-57
pubmed: 21359551
Microbiol Mol Biol Rev. 2013 Sep;77(3):357-79
pubmed: 24006469
Photosynth Res. 2014 Sep;121(2-3):135-50
pubmed: 24907906
J Exp Bot. 2008;59(7):1441-61
pubmed: 17578868
Proc Natl Acad Sci U S A. 2013 Jan 15;110(3):1053-8
pubmed: 23277585
PLoS One. 2019 Oct 11;14(10):e0223877
pubmed: 31603944
J Bacteriol. 1997 Feb;179(3):769-74
pubmed: 9006032
BMC Syst Biol. 2010 Apr 28;4:52
pubmed: 20426835
Geobiology. 2010 Jan;8(1):1-23
pubmed: 19863595
Curr Opin Microbiol. 2021 Oct;63:1-9
pubmed: 34098411
Front Microbiol. 2022 Mar 28;13:765105
pubmed: 35418964
Front Microbiol. 2017 Nov 14;8:2132
pubmed: 29184540
DNA Res. 2002 Aug 31;9(4):123-30
pubmed: 12240834
Proc Natl Acad Sci U S A. 2016 Sep 6;113(36):E5354-62
pubmed: 27551079
J Exp Bot. 2017 Jun 1;68(14):3841-3855
pubmed: 28419380
Front Microbiol. 2015 Jun 23;6:604
pubmed: 26157428
Photosynth Res. 2015 Feb;123(2):183-201
pubmed: 25515770
Plant Physiol. 2019 Jan;179(1):156-167
pubmed: 30389783
Science. 2005 Aug 5;309(5736):936-8
pubmed: 16081736
Photosynth Res. 2016 Dec;130(1-3):151-165
pubmed: 26908147
BMC Microbiol. 2018 Oct 17;18(1):134
pubmed: 30332987
Mol Biol Evol. 2020 May 1;37(5):1434-1451
pubmed: 31899489
J Biol Chem. 2013 May 31;288(22):16055-63
pubmed: 23572529
BMC Genomics. 2008 Feb 08;9:75
pubmed: 18261238
J Exp Bot. 2017 Jun 1;68(14):3701-3716
pubmed: 28505361
Proc Natl Acad Sci U S A. 2010 Feb 9;107(6):2455-60
pubmed: 20133749
Funct Plant Biol. 2002 Apr;29(3):161-173
pubmed: 32689463
Appl Environ Microbiol. 2010 Oct;76(19):6664-72
pubmed: 20709851
Plant Physiol. 2016 Mar;170(3):1868-77
pubmed: 26792123
Mikrobiologiia. 2015 Mar-Apr;84(2):144-59
pubmed: 26263620
Proc Natl Acad Sci U S A. 2004 Dec 28;101(52):18228-33
pubmed: 15596724
Genome Res. 2015 Jul;25(7):1043-55
pubmed: 25977477
ISME J. 2014 Mar;8(3):589-600
pubmed: 24132080
J Bacteriol. 2014 Jun;196(12):2210-5
pubmed: 24706738
Photosynth Res. 2008 Jan;95(1):101-9
pubmed: 17922215
PLoS One. 2014 Nov 19;9(11):e112963
pubmed: 25409509
Proc Natl Acad Sci U S A. 1999 Nov 9;96(23):13571-6
pubmed: 10557362
J Exp Bot. 2017 Jun 1;68(14):3785-3796
pubmed: 28520892
J Bacteriol. 2008 Feb;190(3):936-45
pubmed: 17993516
Nat Methods. 2013 Jun;10(6):563-9
pubmed: 23644548
Mol Biol Evol. 2016 Jul;33(7):1870-4
pubmed: 27004904
Bioresour Technol. 2019 Apr;278:424-434
pubmed: 30685131
Front Microbiol. 2020 Jan 31;11:82
pubmed: 32082292
Sci Adv. 2020 May 06;6(19):eaba1269
pubmed: 32494723
Annu Rev Plant Biol. 2020 Apr 29;71:461-485
pubmed: 32151155
Front Genet. 2020 Nov 05;11:568223
pubmed: 33250920
Microbes Environ. 2017 Dec 27;32(4):324-329
pubmed: 29176306
Syst Biol. 2010 May;59(3):307-21
pubmed: 20525638
Curr Opin Plant Biol. 2016 Jun;31:66-75
pubmed: 27060669
Plant Cell Physiol. 2006 Dec;47(12):1630-40
pubmed: 17071623

Auteurs

Jie Tang (J)

School of Food and Bioengineering, Chengdu University, Chengdu, China.

Huizhen Zhou (H)

School of Food and Bioengineering, Chengdu University, Chengdu, China.

Dan Yao (D)

School of Food and Bioengineering, Chengdu University, Chengdu, China.

Sadaf Riaz (S)

School of Environment and Energy, Peking University Shenzhen Graduate School, Shenzhen, China.

Dawei You (D)

School of Environment and Energy, Peking University Shenzhen Graduate School, Shenzhen, China.

Anna Klepacz-Smółka (A)

Department of Bioprocess Engineering, Faculty of Process and Environmental Engineering, Łódź University of Technology, Łódź, Poland.

Maurycy Daroch (M)

School of Environment and Energy, Peking University Shenzhen Graduate School, Shenzhen, China.

Classifications MeSH