Visible microspectrophotometry coupled with machine learning to discriminate the erythrocytic life cycle stages of


Journal

The Analyst
ISSN: 1364-5528
Titre abrégé: Analyst
Pays: England
ID NLM: 0372652

Informations de publication

Date de publication:
13 Jun 2022
Historique:
pubmed: 26 5 2022
medline: 15 6 2022
entrez: 25 5 2022
Statut: epublish

Résumé

Malaria was regarded as the most devastating infectious disease of the 21st century until the COVID-19 pandemic. Asexual blood staged parasites (ABS) play a unique role in ensuring the parasite's survival and pathogenesis. Hitherto, there have been no spectroscopic reports discriminating the life cycle stages of the ABS parasite under physiological conditions. The identification and quantification of the stages in the erythrocytic life cycle is important in monitoring the progression and recovery from the disease. In this study, we explored visible microspectrophotometry coupled to machine learning to discriminate functional ABS parasites at the single cell level. Principal Component Analysis (PCA) showed an excellent discrimination between the different stages of the ABS parasites. Support Vector Machine Analysis provided a 100% prediction for both schizonts and trophozoites, while a 92% and 98% accuracy was achieved for predicting control and ring staged infected RBCs, respectively. This work shows proof of principle for discriminating the life cycle stages of parasites in functional erythrocytes using visible microscopy and thus eliminating the drying and fixative steps that are associated with other optical-based spectroscopic techniques.

Identifiants

pubmed: 35611958
doi: 10.1039/d2an00274d
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

2662-2670

Auteurs

John A Adegoke (JA)

Centre for Biospectroscopy, School of Chemistry, Faculty of Science, Monash University, Clayton, Victoria 3800, Australia. Bayden.wood@monash.edu.

Hannah Raper (H)

Centre for Biospectroscopy, School of Chemistry, Faculty of Science, Monash University, Clayton, Victoria 3800, Australia. Bayden.wood@monash.edu.

Callum Gassner (C)

Centre for Biospectroscopy, School of Chemistry, Faculty of Science, Monash University, Clayton, Victoria 3800, Australia. Bayden.wood@monash.edu.

Philip Heraud (P)

Centre for Biospectroscopy, School of Chemistry, Faculty of Science, Monash University, Clayton, Victoria 3800, Australia. Bayden.wood@monash.edu.

Bayden R Wood (BR)

Centre for Biospectroscopy, School of Chemistry, Faculty of Science, Monash University, Clayton, Victoria 3800, Australia. Bayden.wood@monash.edu.

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Classifications MeSH