Light-induced protein structural dynamics in bacteriophytochrome revealed by time-resolved x-ray solution scattering.


Journal

Science advances
ISSN: 2375-2548
Titre abrégé: Sci Adv
Pays: United States
ID NLM: 101653440

Informations de publication

Date de publication:
27 May 2022
Historique:
entrez: 27 5 2022
pubmed: 28 5 2022
medline: 28 5 2022
Statut: ppublish

Résumé

Bacteriophytochromes (BphPs) are photoreceptors that regulate a wide range of biological mechanisms via red light-absorbing (Pr)-to-far-red light-absorbing (Pfr) reversible photoconversion. The structural dynamics underlying Pfr-to-Pr photoconversion in a liquid solution phase are not well understood. We used time-resolved x-ray solution scattering (TRXSS) to capture light-induced structural transitions in the bathy BphP photosensory module of

Identifiants

pubmed: 35622911
doi: 10.1126/sciadv.abm6278
pmc: PMC9140987
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

eabm6278

Références

Nat Methods. 2008 Oct;5(10):881-6
pubmed: 18806790
EMBO J. 2005 Dec 21;24(24):4247-59
pubmed: 16319927
Acc Chem Res. 2009 Feb 17;42(2):356-66
pubmed: 19117426
J Mol Biol. 2016 Sep 25;428(19):3702-20
pubmed: 27107635
Nat Commun. 2020 Jan 31;11(1):634
pubmed: 32005815
Structure. 2016 Mar 1;24(3):448-57
pubmed: 26853942
Proc Natl Acad Sci U S A. 2008 Sep 23;105(38):14715-20
pubmed: 18799746
Proc Natl Acad Sci U S A. 2010 Apr 20;107(16):7281-6
pubmed: 20406909
Nature. 2014 May 8;509(7499):245-248
pubmed: 24776794
Phys Rev Lett. 2019 Feb 15;122(6):063001
pubmed: 30822093
Elife. 2020 Mar 31;9:
pubmed: 32228856
Biochemistry. 2012 Dec 4;51(48):9667-77
pubmed: 23151047
FEBS J. 2021 Oct;288(20):5986-6002
pubmed: 33864705
Science. 2005 Aug 19;309(5738):1223-7
pubmed: 16020695
J Biol Chem. 2005 Sep 16;280(37):32389-97
pubmed: 16009707
Front Plant Sci. 2021 Apr 29;12:642801
pubmed: 33995441
J Phys Chem Lett. 2017 Sep 21;8(18):4413-4418
pubmed: 28853898
J Phys Chem B. 2012 Jan 26;116(3):1077-88
pubmed: 22098118
Proc Natl Acad Sci U S A. 2007 Jul 24;104(30):12571-6
pubmed: 17640891
Phys Chem Chem Phys. 2016 Apr 7;18(13):8911-8919
pubmed: 26960811
J Mol Biol. 2011 Oct 14;413(1):115-27
pubmed: 21888915
Nat Commun. 2021 Jun 16;12(1):3677
pubmed: 34135339
Chem Sci. 2019 Apr 22;10(22):5749-5760
pubmed: 31293761
Nat Methods. 2014 Sep;11(9):923-6
pubmed: 25108686
Biophys J. 2006 Sep 1;91(5):1811-22
pubmed: 16751241
Proc Natl Acad Sci U S A. 2009 Sep 15;106(37):15639-44
pubmed: 19720999
Nature. 2011 Oct 16;479(7373):428-32
pubmed: 22002602
Anal Chem. 2020 Oct 20;92(20):13864-13870
pubmed: 32955854
Proc Natl Acad Sci U S A. 2020 Jun 30;117(26):14996-15005
pubmed: 32541047
Annu Rev Plant Biol. 2006;57:837-58
pubmed: 16669784
Nat Commun. 2016 Nov 28;7:13678
pubmed: 27892472
Sci Adv. 2017 Mar 03;3(3):e1602498
pubmed: 28275738
Acc Chem Res. 2015 Aug 18;48(8):2200-8
pubmed: 26134248
Nature. 2015 Feb 19;518(7539):385-9
pubmed: 25693570
J Phys Chem Lett. 2020 Aug 6;11(15):5913-5919
pubmed: 32614188
Spectrochim Acta A Mol Biomol Spectrosc. 2021 Apr 5;250:119379
pubmed: 33401182
Phys Rev Lett. 2001 Nov 5;87(19):195508
pubmed: 11690426
FEBS J. 2005 Apr;272(8):1927-36
pubmed: 15819886
Structure. 2012 Aug 8;20(8):1436-46
pubmed: 22795083
Nat Commun. 2018 Nov 21;9(1):4912
pubmed: 30464203
Proc Natl Acad Sci U S A. 2008 Sep 23;105(38):14709-14
pubmed: 18799745
J Am Chem Soc. 2012 Apr 25;134(16):7001-8
pubmed: 22494177
J Comput Chem. 2011 Aug;32(11):2359-68
pubmed: 21541964
J Phys Chem Lett. 2019 Oct 17;10(20):6197-6201
pubmed: 31577445
Structure. 2015 Jul 7;23(7):1179-89
pubmed: 26095026
Photochem Photobiol Sci. 2019 Oct 9;18(10):2484-2496
pubmed: 31418445
Commun Biol. 2019 Jan 3;2:1
pubmed: 30740537
Nature. 2020 Jun;582(7813):520-524
pubmed: 32581378
Structure. 2021 Feb 4;29(2):151-160.e3
pubmed: 32916102
Sci Adv. 2020 Mar 20;6(12):eaaz0981
pubmed: 32219166
Cell Rep Phys Sci. 2021 Aug 18;2(8):
pubmed: 35509376
Proc Natl Acad Sci U S A. 2003 Mar 4;100(5):2807-12
pubmed: 12604773
Sci Adv. 2016 Aug 12;2(8):e1600920
pubmed: 27536728
Trends Microbiol. 2011 Sep;19(9):441-8
pubmed: 21664820
Chemphyschem. 2010 Apr 26;11(6):1090-105
pubmed: 20373318
Nat Methods. 2017 Jan;14(1):71-73
pubmed: 27819658
Chem Sci. 2021 Mar 9;12(15):5555-5565
pubmed: 34168792
Chem Sci. 2019 Sep 3;10(42):9788-9800
pubmed: 32055348

Auteurs

Sang Jin Lee (SJ)

Department of Chemistry and KI for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, Republic of Korea.
Center for Advanced Reaction Dynamics, Institute for Basic Science (IBS), Daejeon 34141, Republic of Korea.

Tae Wu Kim (TW)

Department of Chemistry, Mokpo National University, Muan-gun, Jeollanam-do, 58554, Republic of Korea.

Jong Goo Kim (JG)

Department of Chemistry and KI for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, Republic of Korea.
Center for Advanced Reaction Dynamics, Institute for Basic Science (IBS), Daejeon 34141, Republic of Korea.

Cheolhee Yang (C)

Department of Chemistry and KI for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, Republic of Korea.
Center for Advanced Reaction Dynamics, Institute for Basic Science (IBS), Daejeon 34141, Republic of Korea.

So Ri Yun (SR)

Department of Chemistry and KI for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, Republic of Korea.
Center for Advanced Reaction Dynamics, Institute for Basic Science (IBS), Daejeon 34141, Republic of Korea.

Changin Kim (C)

Department of Chemistry and KI for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, Republic of Korea.
Center for Advanced Reaction Dynamics, Institute for Basic Science (IBS), Daejeon 34141, Republic of Korea.

Zhong Ren (Z)

Department of Chemistry, University of Illinois at Chicago, Chicago, IL 60607, USA.

Indika Kumarapperuma (I)

Department of Chemistry, University of Illinois at Chicago, Chicago, IL 60607, USA.

Jane Kuk (J)

Department of Biochemistry and Molecular Biology, The University of Chicago, Chicago, IL 60637, USA.

Keith Moffat (K)

Department of Biochemistry and Molecular Biology, The University of Chicago, Chicago, IL 60637, USA.

Xiaojing Yang (X)

Department of Chemistry, University of Illinois at Chicago, Chicago, IL 60607, USA.
Department of Ophthalmology and Vision Sciences, University of Illinois at Chicago, Chicago, IL 60607, USA.

Hyotcherl Ihee (H)

Department of Chemistry and KI for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, Republic of Korea.
Center for Advanced Reaction Dynamics, Institute for Basic Science (IBS), Daejeon 34141, Republic of Korea.

Classifications MeSH