Structural Insights into Iron Ions Accumulation in Dps Nanocage.


Journal

International journal of molecular sciences
ISSN: 1422-0067
Titre abrégé: Int J Mol Sci
Pays: Switzerland
ID NLM: 101092791

Informations de publication

Date de publication:
10 May 2022
Historique:
received: 21 04 2022
revised: 07 05 2022
accepted: 08 05 2022
entrez: 28 5 2022
pubmed: 29 5 2022
medline: 1 6 2022
Statut: epublish

Résumé

Dps (DNA-binding protein from starved cells) is well known for the structural protection of bacterial DNA by the formation of highly ordered intracellular assemblies under stress conditions. Moreover, this ferritin-like protein can perform fast oxidation of ferrous ions and subsequently accumulate clusters of ferric ions in its nanocages, thus providing the bacterium with physical and chemical protection. Here, cryo-electron microscopy was used to study the accumulation of iron ions in the nanocage of a Dps protein from

Identifiants

pubmed: 35628121
pii: ijms23105313
doi: 10.3390/ijms23105313
pmc: PMC9140674
pii:
doi:

Substances chimiques

Bacterial Outer Membrane Proteins 0
Escherichia coli Proteins 0
Ions 0
dps protein, E coli 0
Ferritins 9007-73-2
Iron E1UOL152H7

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : Russian Science Foundation
ID : 18-74-10071

Références

FEBS J. 2006 Nov;273(21):4913-28
pubmed: 17018059
J Mol Biol. 2003 Jun 6;329(3):467-77
pubmed: 12767829
FEBS Lett. 2019 Jun;593(12):1360-1371
pubmed: 31090064
Nat Methods. 2017 Mar;14(3):290-296
pubmed: 28165473
FEBS Open Bio. 2020 Jul;10(7):1219-1229
pubmed: 32170832
Cell Mol Life Sci. 2014 Dec;71(24):4911-26
pubmed: 24915944
J Biol Inorg Chem. 2006 Oct;11(7):891-902
pubmed: 16855817
J Am Chem Soc. 2008 Jun 25;130(25):8062-8
pubmed: 18507465
J Struct Biol. 2009 Apr;166(1):22-31
pubmed: 19116170
Inorg Chem. 2019 Sep 3;58(17):11351-11363
pubmed: 31433627
Inorg Chem. 2000 Apr 17;39(8):1828-30
pubmed: 12526579
J Biol Chem. 2003 May 30;278(22):20319-26
pubmed: 12660233
Proc Natl Acad Sci U S A. 2004 Sep 21;101(38):13780-5
pubmed: 15365182
Biomolecules. 2019 Dec 26;10(1):
pubmed: 31888079
J Mol Biol. 2008 Jan 25;375(4):948-59
pubmed: 18061613
Biochem J. 2000 Aug 1;349 Pt 3:783-6
pubmed: 10903139
Metallomics. 2017 Jun 21;9(6):685-698
pubmed: 28418062
FEBS J. 2010 Feb;277(4):903-17
pubmed: 20088882
Int J Mol Sci. 2019 Jan 30;20(3):
pubmed: 30704048
Nat Struct Biol. 1998 Apr;5(4):294-303
pubmed: 9546221
Free Radic Biol Med. 2010 Jan 15;48(2):292-7
pubmed: 19892013
Biometals. 2004 Jun;17(3):197-202
pubmed: 15222465
Angew Chem Int Ed Engl. 2004 May 3;43(19):2527-30
pubmed: 15127443
Subcell Biochem. 2021;96:177-216
pubmed: 33252729
J Mol Biol. 2007 Aug 17;371(3):787-99
pubmed: 17583727
Int J Mol Sci. 2021 Jun 03;22(11):
pubmed: 34205216
J Biol Chem. 2002 Oct 4;277(40):37619-23
pubmed: 12163499
NPG Asia Mater. 2017;9(4):e371
pubmed: 32218880
Genes Dev. 1992 Dec;6(12B):2646-54
pubmed: 1340475
J Biol Chem. 2005 Oct 14;280(41):34776-85
pubmed: 16030020
J Biol Chem. 2002 Aug 2;277(31):27689-96
pubmed: 12016214
J Mol Biol. 2006 Aug 4;361(1):105-14
pubmed: 16828801
Biochim Biophys Acta. 2013 Jun;1830(6):3745-55
pubmed: 23396000
Proteins. 2007 Mar 1;66(4):975-83
pubmed: 17186524
PLoS One. 2019 Aug 1;14(8):e0218300
pubmed: 31369577
FEMS Microbiol Rev. 2003 Jun;27(2-3):215-37
pubmed: 12829269
J Biol Chem. 2011 Oct 7;286(40):34872-82
pubmed: 21768097
Nanoscale. 2019 Sep 19;11(36):16868-16878
pubmed: 31482911
Mol Microbiol. 2005 Aug;57(4):1101-12
pubmed: 16091047
Nature. 2013 Jul 4;499(7456):102-6
pubmed: 23698367
Inorg Chem. 2013 Nov 4;52(21):12223-33
pubmed: 24102308
Nat Methods. 2019 Nov;16(11):1146-1152
pubmed: 31591575
Molecules. 2017 Nov 05;22(11):
pubmed: 29113077
J Bacteriol. 1994 Jul;176(13):3928-35
pubmed: 8021175
Biochemistry. 2005 Apr 19;44(15):5572-8
pubmed: 15823015
Nanotechnology. 2016 Nov 18;27(46):46LT02
pubmed: 27734804
J Mol Biol. 2004 Jun 18;339(5):1103-13
pubmed: 15178251

Auteurs

Yury Chesnokov (Y)

Shubnikov Institute of Crystallography of Federal Scientific Research Centre "Crystallography and Photonics" of Russian Academy of Sciences, Leninskiy Prospect, 59, 119333 Moscow, Russia.
National Research Center "Kurchatov Institute", Akademika Kurchatova pl., 1, 123182 Moscow, Russia.

Andrey Mozhaev (A)

Shubnikov Institute of Crystallography of Federal Scientific Research Centre "Crystallography and Photonics" of Russian Academy of Sciences, Leninskiy Prospect, 59, 119333 Moscow, Russia.
Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry of Russian Academy of Sciences, Miklukho-Maklaya, 16/10, 117997 Moscow, Russia.
Faculty of Biology and Biotechnologies, National Research University Higher School of Economics, Myasnitskaya Str. 20, 101000 Moscow, Russia.
Institute of Translational Medicine, Pirogov Russian National Research Medical University, Ostrovitianov Str. 1, 117997 Moscow, Russia.

Roman Kamyshinsky (R)

Shubnikov Institute of Crystallography of Federal Scientific Research Centre "Crystallography and Photonics" of Russian Academy of Sciences, Leninskiy Prospect, 59, 119333 Moscow, Russia.
National Research Center "Kurchatov Institute", Akademika Kurchatova pl., 1, 123182 Moscow, Russia.
Moscow Institute of Physics and Technology, Institutsky Lane 9, 141700 Dolgoprudny, Russia.

Alexander Gordienko (A)

Shubnikov Institute of Crystallography of Federal Scientific Research Centre "Crystallography and Photonics" of Russian Academy of Sciences, Leninskiy Prospect, 59, 119333 Moscow, Russia.
Physics Department, Lomonosov Moscow State University, 119991 Moscow, Russia.

Liubov Dadinova (L)

Shubnikov Institute of Crystallography of Federal Scientific Research Centre "Crystallography and Photonics" of Russian Academy of Sciences, Leninskiy Prospect, 59, 119333 Moscow, Russia.

Articles similaires

Photosynthesis Ribulose-Bisphosphate Carboxylase Carbon Dioxide Molecular Dynamics Simulation Cyanobacteria
Female Biofilms Animals Lactobacillus Mice
Cryoelectron Microscopy Algorithms Image Processing, Computer-Assisted Consensus Software

Classifications MeSH