Low-Power Lossless Data Compression for Wireless Brain Electrophysiology.


Journal

Sensors (Basel, Switzerland)
ISSN: 1424-8220
Titre abrégé: Sensors (Basel)
Pays: Switzerland
ID NLM: 101204366

Informations de publication

Date de publication:
12 May 2022
Historique:
received: 30 03 2022
revised: 28 04 2022
accepted: 07 05 2022
entrez: 28 5 2022
pubmed: 29 5 2022
medline: 1 6 2022
Statut: epublish

Résumé

Wireless electrophysiology opens important possibilities for neuroscience, especially for recording brain activity in more natural contexts, where exploration and interaction are not restricted by the usual tethered devices. The limiting factor is transmission power and, by extension, battery life required for acquiring large amounts of neural electrophysiological data. We present a digital compression algorithm capable of reducing electrophysiological data to less than 65.5% of its original size without distorting the signals, which we tested in vivo in experimental animals. The algorithm is based on a combination of delta compression and Huffman codes with optimizations for neural signals, which allow it to run in small, low-power Field-Programmable Gate Arrays (FPGAs), requiring few hardware resources. With this algorithm, a hardware prototype was created for wireless data transmission using commercially available devices. The power required by the algorithm itself was less than 3 mW, negligible compared to the power saved by reducing the transmission bandwidth requirements. The compression algorithm and its implementation were designed to be device-agnostic. These developments can be used to create a variety of wired and wireless neural electrophysiology acquisition systems with low power and space requirements without the need for complex or expensive specialized hardware.

Identifiants

pubmed: 35632085
pii: s22103676
doi: 10.3390/s22103676
pmc: PMC9147146
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Références

Neuron. 2017 Feb 8;93(3):480-490
pubmed: 28182904
Nat Commun. 2016 Aug 03;7:12468
pubmed: 27485308
IEEE Trans Biomed Circuits Syst. 2019 Dec;13(6):1645-1654
pubmed: 31647447
Nature. 2017 Nov 8;551(7679):232-236
pubmed: 29120427
Front Neurosci. 2021 Aug 16;15:718478
pubmed: 34504415
IEEE Trans Biomed Eng. 2013 Jul;60(7):1993-2004
pubmed: 23428612
Neuron. 2019 Oct 9;104(1):25-36
pubmed: 31600513
Annu Int Conf IEEE Eng Med Biol Soc. 2020 Jul;2020:3489-3492
pubmed: 33018755
IEEE Trans Biomed Circuits Syst. 2016 Jul 18;10(4):874-883
pubmed: 27448368
J Neurophysiol. 2018 Oct 1;120(4):1859-1871
pubmed: 29995603
Neuron. 2014 Dec 17;84(6):1170-82
pubmed: 25482026
J Neurosci Methods. 2019 Mar 15;316:103-116
pubmed: 30189286
Front Neurosci. 2021 Aug 26;15:682063
pubmed: 34512238
Elife. 2014 Jul 29;3:e03061
pubmed: 25073927
Int J Neural Syst. 2022 Mar;32(3):2250001
pubmed: 34931938
J Neural Eng. 2018 Aug;15(4):046032
pubmed: 29799437
J Neurosci Methods. 2014 Jun 15;230:51-64
pubmed: 24769170
PLoS One. 2011;6(7):e22033
pubmed: 21765934
IEEE Trans Biomed Circuits Syst. 2019 Feb;13(1):1-14
pubmed: 30418918
Curr Biol. 2020 Jun 8;30(11):2116-2130.e6
pubmed: 32413309
Nat Neurosci. 2004 May;7(5):446-51
pubmed: 15114356
Annu Int Conf IEEE Eng Med Biol Soc. 2020 Jul;2020:898-901
pubmed: 33018129
IEEE Trans Neural Syst Rehabil Eng. 2019 Aug;27(8):1529-1538
pubmed: 31331895
Science. 2019 Sep 13;365(6458):1180-1183
pubmed: 31515395
IEEE Trans Biomed Circuits Syst. 2017 Feb;11(1):1-14
pubmed: 27337721
Annu Rev Neurosci. 2008;31:69-89
pubmed: 18284371
J Neurosci. 1990 Feb;10(2):420-35
pubmed: 2303851
Elife. 2020 Jul 20;9:
pubmed: 32687054
Annu Int Conf IEEE Eng Med Biol Soc. 2012;2012:3507-10
pubmed: 23366683
Annu Int Conf IEEE Eng Med Biol Soc. 2013;2013:2156-9
pubmed: 24110148
J Neural Eng. 2017 Aug;14(4):045003
pubmed: 28169219
IEEE Trans Biomed Circuits Syst. 2019 Dec;13(6):1635-1644
pubmed: 31545742
J Neurosci Methods. 2017 Feb 15;278:76-86
pubmed: 28069391
Sensors (Basel). 2016 Sep 24;16(10):
pubmed: 27669264
Annu Int Conf IEEE Eng Med Biol Soc. 2014;2014:3138-41
pubmed: 25570656

Auteurs

Aarón Cuevas-López (A)

Universitat Politècnica de València, 46022 Valencia, Valencia, Spain.

Elena Pérez-Montoyo (E)

Instituto de Neurociencias de Alicante, 03550 Sant Joan d'Alacant, Alicante, Spain.

Víctor J López-Madrona (VJ)

Instituto de Neurociencias de Alicante, 03550 Sant Joan d'Alacant, Alicante, Spain.

Santiago Canals (S)

Instituto de Neurociencias de Alicante, 03550 Sant Joan d'Alacant, Alicante, Spain.

David Moratal (D)

Universitat Politècnica de València, 46022 Valencia, Valencia, Spain.

Articles similaires

Robotic Surgical Procedures Animals Humans Telemedicine Models, Animal

Odour generalisation and detection dog training.

Lyn Caldicott, Thomas W Pike, Helen E Zulch et al.
1.00
Animals Odorants Dogs Generalization, Psychological Smell

Selecting optimal software code descriptors-The case of Java.

Yegor Bugayenko, Zamira Kholmatova, Artem Kruglov et al.
1.00
Software Algorithms Programming Languages
Animals TOR Serine-Threonine Kinases Colorectal Neoplasms Colitis Mice

Classifications MeSH