Development of Multiplex PCR-based Protocols for Simultaneous Caterpillar Diagnosis of Three Spodoptera and One Mamestra Species (Lepidoptera: Noctuidae).

Noctuidae internal transcribed spacer 1 molecular identification multiplex PCR species diagnosis

Journal

Journal of economic entomology
ISSN: 1938-291X
Titre abrégé: J Econ Entomol
Pays: England
ID NLM: 2985127R

Informations de publication

Date de publication:
12 10 2022
Historique:
received: 01 11 2021
pubmed: 1 6 2022
medline: 14 10 2022
entrez: 31 5 2022
Statut: ppublish

Résumé

Since many noctuid moth species are highly destructive crop pests, it is essential to establish proper management strategies, which primarily require accurate and rapid species identification. However, diagnosis of noctuid species in the field, particularly at the larval stage, is very difficult due to their morphological similarity and individual color variation. In particular, caterpillars of Spodoptera exigua (Hübner), Spodoptera litura (Fabricius), Spodoptera frugiperda (Smith), and Mamestra brassicae (L.) (Lepidoptera: Noctuidae) are hard to be identified by morphology and frequently found on the same host crops in the same season, thus requiring a reliable species diagnosis method. To efficiently diagnose these species, we identified species-specific internal transcribed spacer 1 (ITS1) sequences and developed two molecular species diagnosis protocols using ITS1 markers. The first protocol was multiplex conventional PCR in conjunction with subsequent gel electrophoresis for species identification based on amplicon size. The second protocol was based on multiplex real-time PCR using fluorescent dye-labeled primers for single-step diagnosis. Template genomic DNA (gDNA) prepared by the DNA release method was also suitable for both protocols as the template prepared by DNA extraction. The two protocols enabled rapid and robust species diagnosis using a single multiplex PCR step. Depending on laboratory instrumentation, one of the two protocols can be easily adapted for species diagnosis of the four noctuid caterpillars in the field, which is essential for establishing proper management strategies. The multiplex real-time PCR protocol, in particular, will facilitate accurate diagnosis of the four species in a single step regardless of template gDNA quality.

Identifiants

pubmed: 35640235
pii: 6594670
doi: 10.1093/jee/toac076
doi:

Substances chimiques

Fluorescent Dyes 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1703-1711

Subventions

Organisme : Rural Development Administration, Republic of Korea
Organisme : Brain Korea 21 Plus Program

Informations de copyright

© The Author(s) 2022. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Auteurs

Su Ryeo Park (SR)

Department of Agricultural Biotechnology, Seoul National University, 08826, Seoul, Republic of Korea.

Do Eun Lee (DE)

Department of Agricultural Biotechnology, Seoul National University, 08826, Seoul, Republic of Korea.

Hwa Yeun Nam (HY)

Program of Applied Biology, College of Agriculture and Life Sciences, Kangwon National University, 24341, Chuncheon, Republic of Korea.

Juil Kim (J)

Program of Applied Biology, College of Agriculture and Life Sciences, Kangwon National University, 24341, Chuncheon, Republic of Korea.

Si Hyeock Lee (SH)

Department of Agricultural Biotechnology, Seoul National University, 08826, Seoul, Republic of Korea.
Research Institute of Agriculture and Life Sciences, Seoul National University, 08826, Seoul, Republic of Korea.

Ju Hyeon Kim (JH)

Research Institute of Agriculture and Life Sciences, Seoul National University, 08826, Seoul, Republic of Korea.
Department of Tropical Medicine and Parasitology, Seoul National University College of Medicine, 03080, Seoul, Republic of Korea.

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