An open dataset of

data resource genomic epidemiology genomics malaria plasmodium vivax

Journal

Wellcome open research
ISSN: 2398-502X
Titre abrégé: Wellcome Open Res
Pays: England
ID NLM: 101696457

Informations de publication

Date de publication:
2022
Historique:
accepted: 08 04 2022
entrez: 2 6 2022
pubmed: 3 6 2022
medline: 3 6 2022
Statut: epublish

Résumé

This report describes the MalariaGEN Pv4 dataset, a new release of curated genome variation data on 1,895 samples of

Identifiants

pubmed: 35651694
doi: 10.12688/wellcomeopenres.17795.1
pmc: PMC9127374
doi:

Banques de données

figshare
['10.6084/m9.figshare.19367876']

Types de publication

Journal Article

Langues

eng

Pagination

136

Subventions

Organisme : Wellcome Trust
ID : 200909/Z/16/Z
Pays : United Kingdom
Organisme : Medical Research Council
ID : MR/M006212/1
Pays : United Kingdom
Organisme : NIAID NIH HHS
ID : R01 AI160457
Pays : United States

Informations de copyright

Copyright: © 2022 MalariaGEN et al.

Déclaration de conflit d'intérêts

No competing interests were disclosed.

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Auteurs

Ishag Adam (I)

Faculty of Medicine, University of Khartoum, Khartoum, Sudan.

Mohammad Shafiul Alam (MS)

Infectious Diseases Division, International Centre for Diarrheal Diseases Research, Bangladesh (ICDDR,B), Dhaka, Bangladesh.

Sisay Alemu (S)

Armauer Hansen Research Unit (AHRI), Addis Ababa, Ethiopia.
Addis Ababa University, Addis Ababa, Ethiopia.
MilliporeSigma (Bioreliance), Rockville, USA.

Chanaki Amaratunga (C)

National Institute of Allergy and Infectious Diseases (NIAID), NIH, Bethesda, USA.

Roberto Amato (R)

Wellcome Sanger Institute, Hinxton, UK.

Voahangy Andrianaranjaka (V)

Université d'Antananarivo, Antananarivo, Madagascar.

Nicholas M Anstey (NM)

Global and Tropical Health Division, Menzies School of Health Research and Charles Darwin University, Darwin, Australia.

Abraham Aseffa (A)

Armauer Hansen Research Unit (AHRI), Addis Ababa, Ethiopia.

Elizabeth Ashley (E)

Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital, Vientiane, Lao People's Democratic Republic.
Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK.

Ashenafi Assefa (A)

Ethiopian Public Health Institute, Addis Ababa, Ethiopia.

Sarah Auburn (S)

Global and Tropical Health Division, Menzies School of Health Research and Charles Darwin University, Darwin, Australia.
Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK.
Mahidol-Oxford Tropical Medicine Research Unit, Mahidol University, Bangkok, Thailand.

Bridget E Barber (BE)

Menzies School of Health Research, Darwin, Australia.
QIMR Berghofer Medical Research Institute, Brisbane, Australia.

Alyssa Barry (A)

Walter and Eliza Hall Institute, Parkville, Australia.
Deakin University, Geelong, Australia.
Burnet Institute, Melbourne, Australia.

Dhelio Batista Pereira (D)

Centro de Pesquisa em Medicina Tropical de Rondônia, Porto Velho, Brazil.

Jun Cao (J)

National Health Commission Key Laboratory of Parasitic Disease Control and Prevention, Jiangsu Provincial Key Laboratory on Parasite and Vector Control Technology, Jiangsu Institute of Parasitic Diseases, Wuxi, China.
Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, China.

Nguyen Hoang Chau (NH)

Oxford University Clinical Research Unit, Hospital for Tropical Diseases, Ho Chi Minh City, Vietnam.

Kesinee Chotivanich (K)

Mahidol University, Bangkok, Thailand.

Cindy Chu (C)

Shoklo Malaria Research Unit, Mahidol-Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, Mae Sot, Thailand.

Arjen M Dondorp (AM)

Mahidol-Oxford Tropical Medicine Research Unit, Mahidol University, Bangkok, Thailand.

Eleanor Drury (E)

Wellcome Sanger Institute, Hinxton, UK.

Diego F Echeverry (DF)

Departamento de Microbiologia, Facultad de Salud, Universidad del Valle, Cali, Colombia.

Berhanu Erko (B)

Aklilu Lemma Institute of Pathobiology, Addis Ababa University, Addis Ababa, Ethiopia.

Fe Espino (F)

Research Institute for Tropical Medicine, Department of Health, Manila, Philippines.

Rick Fairhurst (R)

National Institutes of Health (NIH), Bethesda, USA.

Abdul Faiz (A)

Dev Care Foundation, Dhaka, Bangladesh.

María Fernanda Villegas (M)

Centro de Investigaciones Clinicas, Cali, Colombia.

Qi Gao (Q)

National Health Commission Key Laboratory of Parasitic Disease Control and Prevention, Jiangsu Provincial Key Laboratory on Parasite and Vector Control Technology, Jiangsu Institute of Parasitic Diseases, Wuxi, China.

Lemu Golassa (L)

Aklilu Lemma Institute of Pathobiology, Addis Ababa University, Addis Ababa, Ethiopia.

Sonia Goncalves (S)

Wellcome Sanger Institute, Hinxton, UK.

Matthew J Grigg (MJ)

Global and Tropical Health Division, Menzies School of Health Research and Charles Darwin University, Darwin, Australia.

Yaghoob Hamedi (Y)

Infectious and Tropical Diseases Research Center, Hormozgan University of Medical Sciences, Bandar Abbas, Iran.

Tran Tinh Hien (TT)

Oxford University Clinical Research Unit, Hospital for Tropical Diseases, Ho Chi Minh City, Vietnam.

Ye Htut (Y)

Department of Medical Research, Yangon, Myanmar.

Kimberly J Johnson (KJ)

Wellcome Sanger Institute, Hinxton, UK.

Nadira Karunaweera (N)

University of Colombo, Colombo, Sri Lanka.
School of Public Health, Harvard University, Boston, USA.

Wasif Khan (W)

Infectious Diseases Division, International Centre for Diarrheal Diseases Research, Bangladesh (ICDDR,B), Dhaka, Bangladesh.

Srivicha Krudsood (S)

Mahidol University, Bangkok, Thailand.

Dominic P Kwiatkowski (DP)

Wellcome Sanger Institute, Hinxton, UK.

Marcus Lacerda (M)

Instituto de Pesquisa Clínica Carlos Borborema, Fundação de Medicina Tropical Dr Heitor Vieira Dourado, Manaus, Brazil.
Instituto Leônidas & Maria Deane, Fundação Oswaldo Cruz, Manaus, Brazil.

Benedikt Ley (B)

Global and Tropical Health Division, Menzies School of Health Research and Charles Darwin University, Darwin, Australia.

Pharath Lim (P)

National Institute of Allergy and Infectious Diseases (NIAID), NIH, Bethesda, USA.
Parsons Corporation, Walter Reed Army Institute of Research (WRAIR), Silver Spring, USA.

Yaobao Liu (Y)

National Health Commission Key Laboratory of Parasitic Disease Control and Prevention, Jiangsu Provincial Key Laboratory on Parasite and Vector Control Technology, Jiangsu Institute of Parasitic Diseases, Wuxi, China.
Center for Global Health, School of Public Health, Nanjing Medical University, Nanjing, China.

Alejandro Llanos-Cuentas (A)

Cayetano Heredia University, Lima, Peru.

Chanthap Lon (C)

National Institute of Allergy and Infectious Diseases, Phnom Penh, Cambodia.

Tatiana Lopera-Mesa (T)

Universidad de Antioquia, Medellin, Colombia.

Jutta Marfurt (J)

Global and Tropical Health Division, Menzies School of Health Research and Charles Darwin University, Darwin, Australia.

Pascal Michon (P)

National University of Vanuatu, Port-Vila, Vanuatu.

Olivo Miotto (O)

Wellcome Sanger Institute, Hinxton, UK.
Mahidol-Oxford Tropical Medicine Research Unit, Mahidol University, Bangkok, Thailand.

Rezika Mohammed (R)

Department of Internal Medicine, University of Gondar, Gondar, Ethiopia.

Ivo Mueller (I)

Walter and Eliza Hall Institute, Parkville, Australia.

Chayadol Namaik-Larp (C)

Umphang Hospital, Tak, Thailand.

Paul N Newton (PN)

Lao-Oxford-Mahosot Hospital-Wellcome Trust Research Unit, Microbiology Laboratory, Mahosot Hospital, Vientiane, Lao People's Democratic Republic.
Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK.

Thuy-Nhien Nguyen (TN)

Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK.
Oxford University Clinical Research Unit, Hospital for Tropical Diseases, Ho Chi Minh City, Vietnam.

Francois Nosten (F)

Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK.
Shoklo Malaria Research Unit, Mahidol-Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, Mae Sot, Thailand.

Rintis Noviyanti (R)

Eijkman Institute for Molecular Biology, Jakarta, Indonesia.

Zuleima Pava (Z)

Centro Internacionale de Entrenamiento e Investigaciones Medicas, Cali, Colombia.

Richard D Pearson (RD)

Wellcome Sanger Institute, Hinxton, UK.

Beyene Petros (B)

Addis Ababa University, Addis Ababa, Ethiopia.

Aung P Phyo (AP)

Mahidol-Oxford Tropical Medicine Research Unit, Mahidol University, Bangkok, Thailand.
Shoklo Malaria Research Unit, Bangkok, Thailand.

Ric N Price (RN)

Global and Tropical Health Division, Menzies School of Health Research and Charles Darwin University, Darwin, Australia.
Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK.
Mahidol-Oxford Tropical Medicine Research Unit, Mahidol University, Bangkok, Thailand.

Sasithon Pukrittayakamee (S)

Mahidol University, Bangkok, Thailand.

Awab Ghulam Rahim (AG)

Nangarhar Medical Faculty, Nangarhar University, Ministry of Higher Education, Jalalabad, Afghanistan.

Milijaona Randrianarivelojosia (M)

Institut Pasteur de Madagascar, Antananarivo, Madagascar.
Universités d'Antananarivo et de Mahajanga, Antananarivo, Madagascar.

Julian C Rayner (JC)

Cambridge Institute for Medical Research, University of Cambridge, Cambridge, UK.

Angela Rumaseb (A)

Global and Tropical Health Division, Menzies School of Health Research and Charles Darwin University, Darwin, Australia.

Sasha V Siegel (SV)

Wellcome Sanger Institute, Hinxton, UK.

Victoria J Simpson (VJ)

Wellcome Sanger Institute, Hinxton, UK.

Kamala Thriemer (K)

Global and Tropical Health Division, Menzies School of Health Research and Charles Darwin University, Darwin, Australia.

Alberto Tobon-Castano (A)

Universidad de Antioquia, Medellin, Colombia.

Hidayat Trimarsanto (H)

Eijkman Institute for Molecular Biology, Jakarta, Indonesia.

Marcelo Urbano Ferreira (M)

Universidade de São Paulo, São Paulo, Brazil.
Institute of Hygiene and Tropical Medicine, NOVA University of Lisbon, Lisbon, Portugal.

Ivan D Vélez (ID)

University of Antioquia, Medellin, Colombia.

Sonam Wangchuk (S)

Royal Center for Disease Control, Department of Public Health, Ministry of Health, Thimphu, Bhutan.

Thomas E Wellems (TE)

National Institute of Allergy and Infectious Diseases (NIAID), NIH, Bethesda, USA.

Nicholas J White (NJ)

Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK.
Mahidol-Oxford Tropical Medicine Research Unit, Mahidol University, Bangkok, Thailand.

Timothy William (T)

Clinical Research Centre, Queen Elizabeth Hospital, Sabah, Malaysia.
Infectious Diseases Society Sabah-Menzies School of Health Research Clinical Research Unit, Kota Kinabalu, Sabah, Malaysia.

Maria F Yasnot (MF)

Grupo de Investigaciones Microbiológicas y Biomédicas de Córdoba-GIMBIC, Universidad de Córdoba, Monteria, Colombia.

Daniel Yilma (D)

Jimma University, Jimma, Ethiopia.

Classifications MeSH