Hypergraph Based Data Model for Complex Health Data Exploration and Its Implementation in PREDIMED Clinical Data Warehouse.

Clinical Data Warehouse data lake flexibility hypergraphs massive and complex data interactive exploration property graphs

Journal

Studies in health technology and informatics
ISSN: 1879-8365
Titre abrégé: Stud Health Technol Inform
Pays: Netherlands
ID NLM: 9214582

Informations de publication

Date de publication:
06 Jun 2022
Historique:
entrez: 8 6 2022
pubmed: 9 6 2022
medline: 10 6 2022
Statut: ppublish

Résumé

Within the PREDIMED Clinical Data Warehouse (CDW) of Grenoble Alpes University Hospital (CHUGA), we have developed a hypergraph based operational data model, aiming at empowering physicians to explore, visualize and qualitatively analyze interactively the complex and massive information of the patients treated in CHUGA. This model constitutes a central target structure, expressed in a dual form, both graphical and formal, which gathers the concepts and their semantic relations into a hypergraph whose implementation can easily be manipulated by medical experts. The implementation is based on a property graph database linked to an interactive graphical interface allowing to navigate through the data and to interact in real time with a search engine, visualization and analysis tools. This model and its agile implementation allow for easy structural changes inherent to the evolution of techniques and practices in the health field. This flexibility provides adaptability to the evolution of interoperability standards.

Identifiants

pubmed: 35673030
pii: SHTI220091
doi: 10.3233/SHTI220091
doi:

Types de publication

Journal Article

Langues

eng

Pagination

335-339

Investigateurs

Pierrick Bedouch (P)
Jean-François Blatier (JF)
Jean-Luc Bosson (JL)
Alban Caporossi (A)
Sébastien Chanoine (S)
Katia Charrière (K)
Brigitte Cohard (B)
Jérôme Fauconnier (J)
Joris Giai (J)
Pierre-Ephrem Madiot (PE)

Auteurs

Christophe Cancé (C)

TIMC, Univ. Grenoble Alpes, CNRS, VetAgro'Sup, Grenoble INP, CHU Grenoble Alpes, F-38000, Grenoble, France.

Christian Lenne (C)

Clinical Investigation Center-Technological Innovation, Univ. Grenoble Alpes, INSERM CIC1406, CHUGA, Grenoble, France.

Svetlana Artemova (S)

CHU Grenoble Alpes (CHUGA), F-38000, Grenoble, France.
Clinical Investigation Center-Technological Innovation, Univ. Grenoble Alpes, INSERM CIC1406, CHUGA, Grenoble, France.
Public Health Department, CHU Grenoble Alpes, F-38000, Grenoble, France.

Pascal Mossuz (P)

CHU Grenoble Alpes (CHUGA), F-38000, Grenoble, France.
Department of Biological Hematology, Grenoble Alpes University Hospital, 38400 Grenoble, France.
IAB, Univ. Grenoble Alpes, CNRS, INSERM, Grenoble, France.

Alexandre Moreau-Gaudry (A)

CHU Grenoble Alpes (CHUGA), F-38000, Grenoble, France.
Clinical Investigation Center-Technological Innovation, Univ. Grenoble Alpes, INSERM CIC1406, CHUGA, Grenoble, France.
Public Health Department, CHU Grenoble Alpes, F-38000, Grenoble, France.
TIMC, Univ. Grenoble Alpes, CNRS, VetAgro'Sup, Grenoble INP, CHU Grenoble Alpes, F-38000, Grenoble, France.

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Classifications MeSH