Machine learning for contour classification in TG-263 noncompliant databases.


Journal

Journal of applied clinical medical physics
ISSN: 1526-9914
Titre abrégé: J Appl Clin Med Phys
Pays: United States
ID NLM: 101089176

Informations de publication

Date de publication:
Sep 2022
Historique:
revised: 16 03 2022
received: 01 09 2021
accepted: 19 04 2022
pubmed: 11 6 2022
medline: 28 9 2022
entrez: 10 6 2022
Statut: ppublish

Résumé

A large volume of medical data are labeled using nonstandardized nomenclature. Although efforts have been made by the American Association of Physicists in Medicine (AAPM) to standardize nomenclature through Task Group 263 (TG-263), there remain noncompliant databases. This work aims to create an algorithm that can analyze anatomical contours in patients with head and neck cancer and classify them into TG-263 compliant nomenclature. To create an accurate algorithm capable of such classification, a combined approaching using both binary images of individual slices of anatomical contours themselves, as well as center of mass coordinates of the structures are input into a neural network. The center of mass coordinates were scaled using two normalization schemes, a simple linear normalization scheme agnostic of the patient anatomy, and an anatomical normalization scheme dependent on patient anatomy. The results of all of the individual slice classifications are then aggregated into a single classification by means of a voting algorithm. The total classification accuracy of the final algorithms was 97.6% mean accuracy per class for nonanatomically normalization scheme, and 97.9% mean accuracy per class for anatomically normalization scheme. The total accuracy was 99.0% (13 errors in 1302 structures) for the nonanatomically normalization scheme, and 98.3% (22 errors in 1302 structures) for the anatomically normalization scheme.

Identifiants

pubmed: 35686988
doi: 10.1002/acm2.13662
pmc: PMC9512347
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e13662

Informations de copyright

© 2022 The Authors. Journal of Applied Clinical Medical Physics published by Wiley Periodicals, LLC on behalf of The American Association of Physicists in Medicine.

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Auteurs

David Livermore (D)

Department of Physics and Atmospheric Science, Dalhousie University, 6299 South St, Halifax, NS B3H 4R2, Canada.

Thomas Trappenberg (T)

Faculty of Computer Science, Dalhousie University, 6050 University Avenue, Halifax, NS B3H 4R2, Canada.

Alasdair Syme (A)

Department of Physics and Atmospheric Science, Dalhousie University, 6299 South St, Halifax, NS B3H 4R2, Canada.
Department of Radiation Oncology, Dalhousie University, 5820 University Avenue, Halifax, NS B3H 1V7, Canada.

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Classifications MeSH