International comparisons of laboratory values from the 4CE collaborative to predict COVID-19 mortality.


Journal

NPJ digital medicine
ISSN: 2398-6352
Titre abrégé: NPJ Digit Med
Pays: England
ID NLM: 101731738

Informations de publication

Date de publication:
13 Jun 2022
Historique:
received: 04 02 2021
accepted: 11 03 2022
entrez: 13 6 2022
pubmed: 14 6 2022
medline: 14 6 2022
Statut: epublish

Résumé

Given the growing number of prediction algorithms developed to predict COVID-19 mortality, we evaluated the transportability of a mortality prediction algorithm using a multi-national network of healthcare systems. We predicted COVID-19 mortality using baseline commonly measured laboratory values and standard demographic and clinical covariates across healthcare systems, countries, and continents. Specifically, we trained a Cox regression model with nine measured laboratory test values, standard demographics at admission, and comorbidity burden pre-admission. These models were compared at site, country, and continent level. Of the 39,969 hospitalized patients with COVID-19 (68.6% male), 5717 (14.3%) died. In the Cox model, age, albumin, AST, creatine, CRP, and white blood cell count are most predictive of mortality. The baseline covariates are more predictive of mortality during the early days of COVID-19 hospitalization. Models trained at healthcare systems with larger cohort size largely retain good transportability performance when porting to different sites. The combination of routine laboratory test values at admission along with basic demographic features can predict mortality in patients hospitalized with COVID-19. Importantly, this potentially deployable model differs from prior work by demonstrating not only consistent performance but also reliable transportability across healthcare systems in the US and Europe, highlighting the generalizability of this model and the overall approach.

Identifiants

pubmed: 35697747
doi: 10.1038/s41746-022-00601-0
pii: 10.1038/s41746-022-00601-0
pmc: PMC9192605
doi:

Types de publication

Journal Article

Langues

eng

Pagination

74

Subventions

Organisme : Medical Research Council
ID : MC_PC_18034
Pays : United Kingdom
Organisme : British Heart Foundation
ID : FS/19/52/34563
Pays : United Kingdom
Organisme : NLM NIH HHS
ID : R01 LM013345
Pays : United States
Organisme : NINDS NIH HHS
ID : R01 NS098023
Pays : United States
Organisme : NINDS NIH HHS
ID : R01 NS124882
Pays : United States
Organisme : NHGRI NIH HHS
ID : T32 HG002295
Pays : United States
Organisme : NCATS NIH HHS
ID : UL1 TR001422
Pays : United States
Organisme : NCATS NIH HHS
ID : UL1 TR001420
Pays : United States
Organisme : NIEHS NIH HHS
ID : P30 ES017885
Pays : United States
Organisme : NLM NIH HHS
ID : R01 LM013337
Pays : United States
Organisme : NHLBI NIH HHS
ID : K23 HL148394
Pays : United States
Organisme : NHLBI NIH HHS
ID : L40 HL148910
Pays : United States
Organisme : NHLBI NIH HHS
ID : U24 HL148865
Pays : United States

Investigateurs

James R Aaron (JR)
Adem Albayrak (A)
Giuseppe Albi (G)
Anna Alloni (A)
Danilo F Amendola (DF)
François Angoulvant (F)
Li L L J Anthony (LLLJ)
Fatima Ashraf (F)
Andrew Atz (A)
Paul Avillach (P)
Paula S Azevedo (PS)
James Balshi (J)
Brett K Beaulieu-Jones (BK)
Antonio Bellasi (A)
Vincent Benoit (V)
Michele Beraghi (M)
José Luis Bernal-Sobrino (JL)
Mélodie Bernaux (M)
Romain Bey (R)
Surbhi Bhatnagar (S)
Alvar Blanco-Martínez (A)
Martin Boeker (M)
John Booth (J)
Silvano Bosari (S)
Robert L Bradford (RL)
Gabriel A Brat (GA)
Stéphane Bréant (S)
Nicholas W Brown (NW)
Raffaele Bruno (R)
William A Bryant (WA)
Mauro Bucalo (M)
Emily Bucholz (E)
Anita Burgun (A)
Tianxi Cai (T)
Aldo Carmona (A)
Charlotte Caucheteux (C)
Julien Champ (J)
Krista Y Chen (KY)
Jin Chen (J)
Lorenzo Chiudinelli (L)
Kelly Cho (K)
James J Cimino (JJ)
Tiago K Colicchio (TK)
Sylvie Cormont (S)
Sébastien Cossin (S)
Jean B Craig (JB)
Juan Luis Cruz-Bermúdez (JL)
Jaime Cruz-Rojo (J)
Mohamad Daniar (M)
Christel Daniel (C)
Priyam Das (P)
Batsal Devkota (B)
Audrey Dionne (A)
Rui Duan (R)
Julien Dubiel (J)
Loic Esteve (L)
Hossein Estiri (H)
Shirley Fan (S)
Robert W Follett (RW)
Thomas Ganslandt (T)
Noelia García-Barrio (N)
Lana X Garmire (LX)
Nils Gehlenborg (N)
Emily J Getzen (EJ)
Alon Geva (A)
Tobias Gradinger (T)
Alexandre Gramfort (A)
Romain Griffier (R)
Nicolas Griffon (N)
Olivier Grisel (O)
Alba Gutiérrez-Sacristán (A)
Larry Han (L)
David A Hanauer (DA)
Christian Haverkamp (C)
Derek Y Hazard (DY)
Bing He (B)
Darren W Henderson (DW)
Martin Hilka (M)
Kenneth M Huling (KM)
Meghan R Hutch (MR)
Richard W Issitt (RW)
Anne Sophie Jannot (AS)
Vianney Jouhet (V)
Ramakanth Kavuluru (R)
Chris J Kennedy (CJ)
Kate F Kernan (KF)
Daniel A Key (DA)
Katie Kirchoff (K)
Jeffrey G Klann (JG)
Isaac S Kohane (IS)
Ian D Krantz (ID)
Detlef Kraska (D)
Ashok K Krishnamurthy (AK)
Trang T Le (TT)
Judith Leblanc (J)
Guillaume Lemaitre (G)
Leslie Lenert (L)
Damien Leprovost (D)
Molei Liu (M)
Qi Long (Q)
Sara Lozano-Zahonero (S)
Sadiqa Mahmood (S)
Sarah E Maidlow (SE)
Adeline Makoudjou (A)
Anupama Maram (A)
Patricia Martel (P)
Marcelo R Martins (MR)
Jayson S Marwaha (JS)
Aaron J Masino (AJ)
Maria Mazzitelli (M)
Arthur Mensch (A)
Marianna Milano (M)
Marcos F Minicucci (MF)
Bertrand Moal (B)
Taha Mohseni Ahooyi (TM)
Jason H Moore (JH)
Cinta Moraleda (C)
Jeffrey S Morris (JS)
Karyn L Moshal (KL)
Sajad Mousavi (S)
Douglas A Murad (DA)
Shawn N Murphy (SN)
Thomas P Naughton (TP)
Carlos Tadeu Breda Neto (CTB)
Jane Newburger (J)
Kee Yuan Ngiam (KY)
Wanjiku F M Njoroge (WFM)
James B Norman (JB)
Jihad Obeid (J)
Marina P Okoshi (MP)
Karen L Olson (KL)
Gilbert S Omenn (GS)
Nina Orlova (N)
Brian D Ostasiewski (BD)
Nathan P Palmer (NP)
Nicolas Paris (N)
Lav P Patel (LP)
Miguel Pedrera-Jiménez (M)
Ashley C Pfaff (AC)
Emily R Pfaff (ER)
Danielle Pillion (D)
Sara Pizzimenti (S)
Hans U Prokosch (HU)
Robson A Prudente (RA)
Andrea Prunotto (A)
Víctor Quirós-González (V)
Rachel B Ramoni (RB)
Maryna Raskin (M)
Siegbert Rieg (S)
Gustavo Roig-Domínguez (G)
Pablo Rojo (P)
Paula Rubio-Mayo (P)
Paolo Sacchi (P)
Carlos Sáez (C)
Elisa Salamanca (E)
Malarkodi Jebathilagam Samayamuthu (MJ)
L Nelson Sanchez-Pinto (LN)
Arnaud Sandrin (A)
Nandhini Santhanam (N)
Janaina C C Santos (JCC)
Fernando J Sanz Vidorreta (FJ)
Maria Savino (M)
Juergen Schuettler (J)
Luigia Scudeller (L)
Neil J Sebire (NJ)
Pablo Serrano-Balazote (P)
Patricia Serre (P)
Arnaud Serret-Larmande (A)
Mohsin Shah (M)
Zahra Shakeri Hossein Abad (ZSH)
Domenick Silvio (D)
Piotr Sliz (P)
Jiyeon Son (J)
Charles Sonday (C)
Andrew M South (AM)
Francesca Sperotto (F)
Zachary H Strasser (ZH)
Amelia L M Tan (ALM)
Bryce W Q Tan (BWQ)
Suzana E Tanni (SE)
Deanne M Taylor (DM)
Ana I Terriza-Torres (AI)
Patric Tippmann (P)
Emma M S Toh (EMS)
Yi-Ju Tseng (YJ)
Andrew K Vallejos (AK)
Gael Varoquaux (G)
Margaret E Vella (ME)
Guillaume Verdy (G)
Jill-Jênn Vie (JJ)
Shyam Visweswaran (S)
Michele Vitacca (M)
Kavishwar B Wagholikar (KB)
Lemuel R Waitman (LR)
Demian Wassermann (D)
Griffin M Weber (GM)
Martin Wolkewitz (M)
Scott Wong (S)
Zongqi Xia (Z)
Xin Xiong (X)
Ye Ye (Y)
Nadir Yehya (N)
William Yuan (W)
Alberto Zambelli (A)
Harrison G Zhang (HG)
Daniela Zöller (D)
Valentina Zuccaro (V)
Chiara Zucco (C)

Informations de copyright

© 2022. The Author(s).

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Auteurs

Griffin M Weber (GM)

Department of Biomedical Informatics, Harvard Medical School, Boston, USA.

Chuan Hong (C)

Department of Biomedical Informatics, Harvard Medical School, Boston, USA.
Department of Biostatistics and Bioinformatics, Duke University, Durham, USA.

Zongqi Xia (Z)

Department of Neurology, University of Pittsburgh, Pittsburgh, USA.

Nathan P Palmer (NP)

Department of Biomedical Informatics, Harvard Medical School, Boston, USA.

Paul Avillach (P)

Department of Biomedical Informatics, Harvard Medical School, Boston, USA.

Sehi L'Yi (S)

Department of Biomedical Informatics, Harvard Medical School, Boston, USA.

Mark S Keller (MS)

Department of Biomedical Informatics, Harvard Medical School, Boston, USA.

Shawn N Murphy (SN)

Department of Neurology, Massachusetts General Hospital, Boston, USA.

Alba Gutiérrez-Sacristán (A)

Department of Biomedical Informatics, Harvard Medical School, Boston, USA.

Clara-Lea Bonzel (CL)

Department of Biomedical Informatics, Harvard Medical School, Boston, USA.

Arnaud Serret-Larmande (A)

Department of biomedical informatics, Hôpital Européen Georges Pompidou, Assistance Publique - Hôpitaux de Paris, Paris, France.

Antoine Neuraz (A)

Department of biomedical informatics, Hôpital Necker-Enfants Malade, Assistance Publique Hôpitaux de Paris (APHP), University of Paris, Paris, France.

Gilbert S Omenn (GS)

Department of Computational Medicine & Bioinformatics, Internal Medicine, Human Genetics, and School of Public Health, University of Michigan, Ann Arbor, USA.

Shyam Visweswaran (S)

Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, USA.

Jeffrey G Klann (JG)

Department of Medicine, Massachusetts General Hospital, Boston, USA.

Andrew M South (AM)

Department of Pediatrics-Section of Nephrology, Brenner Children's Hospital, Wake Forest School of Medicine, Winston Salem, USA.

Ne Hooi Will Loh (NHW)

Department of Anaesthesia, National University Health System, Singapore, Singapore, Singapore.

Mario Cannataro (M)

Department of Medical and Surgical Sciences, Data Analytics Research Center, University Magna Graecia of Catanzaro, Italy, Catanzaro, Italy.

Brett K Beaulieu-Jones (BK)

Department of Biomedical Informatics, Harvard Medical School, Boston, USA.

Riccardo Bellazzi (R)

Department of Electrical, Computer and Biomedical Engineering, University of Pavia, Italy, Pavia, Italy.

Giuseppe Agapito (G)

Department of Legal, Economic and Social Sciences, University Magna Graecia of Catanzaro, Italy, Catanzaro, Italy.

Mario Alessiani (M)

Department of Surgery, ASST Pavia, Lombardia Region Health System, Pavia, Italy.

Bruce J Aronow (BJ)

Departments of Biomedical Informatics, Pediatrics, Cincinnati Children's Hospital Medical Center, University of Cincinnati, Cincinnati, USA.

Douglas S Bell (DS)

Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, USA.

Vincent Benoit (V)

IT department, Innovation & Data, APHP Greater Paris University Hospital, Paris, France.

Florence T Bourgeois (FT)

Department of Pediatrics, Harvard Medical School, Boston, USA.

Luca Chiovato (L)

Unit of Internal Medicine and Endocrinology, Istituti Clinici Scientifici Maugeri SpA SB IRCCS, Pavia, Italy.

Kelly Cho (K)

Massachusetts Veterans Epidemiology Research and Information Center (MAVERIC), VA Boston Healthcare System, Boston, USA.

Arianna Dagliati (A)

Department of Electrical Computer and Biomedical Engineering, University of Pavia, Italy, Pavia, Italy.

Scott L DuVall (SL)

VA Informatics and Computing Infrastructure, VA Salt Lake City Health Care System, Salt Lake City, USA.

Noelia García Barrio (NG)

Health Informatics, Hospital Universitario 12 de Octubre, Madrid, Spain.

David A Hanauer (DA)

Department of Learning Health Sciences, University of Michigan, Ann Arbor, USA.

Yuk-Lam Ho (YL)

Massachusetts Veterans Epidemiology Research and Information Center (MAVERIC), VA Boston Healthcare System, Boston, USA.

John H Holmes (JH)

Department of Biostatistics, Epidemiology, and Informatics, University of Pennsylvania Perelman School of Medicine, Philadelphia, USA.
Institute for Biomedical Informatics, University of Pennsylvania Perelman School of Medicine, Philadelphia, USA.

Richard W Issitt (RW)

Digital Research, Informatics and Virtual Environments (DRIVE), Great Ormond Street Hospital for Children, UK, London, UK.

Molei Liu (M)

Department of Biostatistics, Harvard School of Public Health, Boston, USA.

Yuan Luo (Y)

Department of Preventive Medicine, Northwestern University, Chicago, USA.

Kristine E Lynch (KE)

VA Informatics and Computing Infrastructure, VA Salt Lake City Health Care System, Salt Lake City, USA.

Sarah E Maidlow (SE)

Michigan Institute for Clinical and Health Research, University of Michigan, Ann Arbor, USA.

Alberto Malovini (A)

Laboratory of Informatics and Systems Engineering for Clinical Research, Istituti Clinici Scientifici Maugeri SpA SB IRCCS, Pavia, Italy.

Kenneth D Mandl (KD)

Computational Health Informatics Program, Boston Children's Hospital, Boston, USA.

Chengsheng Mao (C)

Department of Preventive Medicine, Northwestern University, Chicago, USA.

Michael E Matheny (ME)

VA Informatics and Computing Infrastructure, Tennessee Valley Healthcare System Veterans Affairs Medical Center, Nashville, USA.

Jason H Moore (JH)

Institute for Biomedical Informatics, University of Pennsylvania Perelman School of Medicine, Philadelphia, USA.

Jeffrey S Morris (JS)

Department of Biostatistics, Epidemiology, and Biostatistics, University of Pennysylvania Perelman School of Medicine, Philadelphia, USA.

Michele Morris (M)

Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, USA.

Danielle L Mowery (DL)

Department of Biostatistics, Epidemiology, and Informatics, University of Pennsylvania Perelman School of Medicine, Philadelphia, USA.

Kee Yuan Ngiam (KY)

Department of Biomedical informatics, WiSDM, National University Health Systems Singapore, Singapore, Singapore.

Lav P Patel (LP)

Department of Internal Medicine, Division of Medical Informatics, University of Kansas Medical Center, Kansas City, USA.

Miguel Pedrera-Jimenez (M)

Health Informatics, Hospital Universitario 12 de Octubre, Madrid, Spain.

Rachel B Ramoni (RB)

Office of Research and Development, Department of Veterans Affairs, Washington, DC, USA.

Emily R Schriver (ER)

Data Analytics Center, University of Pennsylvania Health System, Philadelphia, USA.

Petra Schubert (P)

Massachusetts Veterans Epidemiology Research and Information Center (MAVERIC), VA Boston Healthcare System, Boston, USA.

Pablo Serrano Balazote (PS)

Health Informatics, Hospital Universitario 12 de Octubre, Madrid, Spain.

Anastasia Spiridou (A)

Digital Research, Informatics and Virtual Environments (DRIVE), Great Ormond Street Hospital for Children, UK, London, UK.

Amelia L M Tan (ALM)

Department of Biomedical Informatics, Harvard Medical School, Boston, USA.

Byorn W L Tan (BWL)

Department of Medicine, National University Hospital, Singapore, Singapore, Singapore.

Valentina Tibollo (V)

Laboratory of Informatics and Systems Engineering for Clinical Research, Istituti Clinici Scientifici Maugeri SpA SB IRCCS, Pavia, Italy.

Carlo Torti (C)

Department of Medical and Surgical Sciences, Infectious and Tropical Disease Unit, University Magna Graecia of Catanzaro, Italy, Catanzaro, Italy.

Enrico M Trecarichi (EM)

Department of Medical and Surgical Sciences, Infectious and Tropical Disease Unit, University Magna Graecia of Catanzaro, Italy, Catanzaro, Italy.

Xuan Wang (X)

Department of Biomedical Informatics, Harvard Medical School, Boston, USA.

Isaac S Kohane (IS)

Department of Biomedical Informatics, Harvard Medical School, Boston, USA.

Tianxi Cai (T)

Department of Biomedical Informatics, Harvard Medical School, Boston, USA. tcai@hsph.harvard.edu.

Gabriel A Brat (GA)

Department of Biomedical Informatics, Harvard Medical School, Boston, USA. gabriel_brat@hms.harvard.edu.

Classifications MeSH