Structural Characterization of a Neutralizing Nanobody With Broad Activity Against SARS-CoV-2 Variants.
COVID-19
SARS-CoV-2
conformation competition
coronavirus
crystal structure
nanobody
receptor-binding domain
Journal
Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977
Informations de publication
Date de publication:
2022
2022
Historique:
received:
14
02
2022
accepted:
19
04
2022
entrez:
20
6
2022
pubmed:
21
6
2022
medline:
21
6
2022
Statut:
epublish
Résumé
SARS-CoV-2 and its variants, such as the Omicron continue to threaten public health. The virus recognizes the host cell by attaching its Spike (S) receptor-binding domain (RBD) to the host receptor, ACE2. Therefore, RBD is a primary target for neutralizing antibodies and vaccines. Here, we report the isolation and biological and structural characterization of a single-chain antibody (nanobody) from RBD-immunized alpaca. The nanobody, named DL28, binds to RBD tightly with a
Identifiants
pubmed: 35722331
doi: 10.3389/fmicb.2022.875840
pmc: PMC9201380
doi:
Types de publication
Journal Article
Langues
eng
Pagination
875840Informations de copyright
Copyright © 2022 Li, Zhou, Luo, Lai, Huang, Zhou, Li, Gautam, Bourgeau, Wang, Bao, Tan, Lavillette and Li.
Déclaration de conflit d'intérêts
A patent application for potential nanobody therapy for the treatment of COVID-19 has been filed for DL28. YZ, SW, and JT were employed by the company Nanjing Crycision Biotech Co., Ltd., Nanjing, China. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
Références
Elife. 2020 Oct 28;9:
pubmed: 33112236
Nat Commun. 2021 Sep 22;12(1):5469
pubmed: 34552091
Sci Rep. 2020 Dec 22;10(1):22370
pubmed: 33353972
J Biol Chem. 2021 Oct;297(4):101202
pubmed: 34537245
EMBO Rep. 2022 Apr 5;23(4):e54199
pubmed: 35253970
Cell. 2020 May 28;181(5):1004-1015.e15
pubmed: 32375025
Acta Crystallogr D Biol Crystallogr. 2004 Jul;60(Pt 7):1220-8
pubmed: 15213383
EMBO Rep. 2021 May 5;22(5):e52325
pubmed: 33904225
Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 1):2126-32
pubmed: 15572765
Cell Host Microbe. 2020 Dec 9;28(6):867-879.e5
pubmed: 33271067
Sci Adv. 2021 May 26;7(22):
pubmed: 34039613
Science. 2020 Mar 13;367(6483):1260-1263
pubmed: 32075877
Nature. 2020 Jul;583(7815):290-295
pubmed: 32422645
Nat Rev Microbiol. 2021 Jul;19(7):409-424
pubmed: 34075212
PLoS Pathog. 2021 Mar 3;17(3):e1009328
pubmed: 33657135
Cell. 2021 Apr 29;184(9):2384-2393.e12
pubmed: 33794143
Nature. 2022 Mar;603(7902):679-686
pubmed: 35042229
Cell. 2020 Apr 16;181(2):281-292.e6
pubmed: 32155444
Methods Enzymol. 1997;276:307-26
pubmed: 27754618
Cell. 2021 Apr 15;184(8):2183-2200.e22
pubmed: 33756110
Nat Struct Mol Biol. 2020 Sep;27(9):846-854
pubmed: 32661423
Cell Rep. 2018 Jul 10;24(2):441-452
pubmed: 29996104
Cell Host Microbe. 2020 Sep 9;28(3):445-454.e6
pubmed: 32585135
Cell Host Microbe. 2021 Mar 10;29(3):477-488.e4
pubmed: 33535027
Cell. 2022 Apr 14;185(8):1389-1401.e18
pubmed: 35344711
Science. 2021 Feb 12;371(6530):
pubmed: 33436526
J Mol Biol. 2007 Sep 21;372(3):774-97
pubmed: 17681537
EMBO Mol Med. 2021 Dec 7;13(12):e14544
pubmed: 34672091
Science. 2020 Dec 18;370(6523):1479-1484
pubmed: 33154108
Nat Commun. 2021 Jul 30;12(1):4635
pubmed: 34330908
Proc Natl Acad Sci U S A. 2020 May 26;117(21):11727-11734
pubmed: 32376634
Nature. 2021 Aug;596(7871):276-280
pubmed: 34237773
Nat Commun. 2021 Jan 11;12(1):264
pubmed: 33431876
Nat Struct Mol Biol. 2020 Oct;27(10):950-958
pubmed: 32737466
Annu Rev Biochem. 2013;82:775-97
pubmed: 23495938
Nat Commun. 2021 Aug 3;12(1):4676
pubmed: 34344900
Cell Rep Med. 2022 Mar 15;3(3):100564
pubmed: 35474739
Nature. 2021 Jul;595(7866):278-282
pubmed: 34098567
Nat Commun. 2020 Sep 4;11(1):4420
pubmed: 32887876
Proc Natl Acad Sci U S A. 2021 May 11;118(19):
pubmed: 33893175
Elife. 2018 May 24;7:
pubmed: 29792401
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):213-21
pubmed: 20124702
Cell Rep Med. 2021 Apr 20;2(4):100255
pubmed: 33842902
Nat Struct Mol Biol. 2020 Oct;27(10):925-933
pubmed: 32699321
EMBO J. 2021 Oct 1;40(19):e107985
pubmed: 34302370
Nature. 2020 Dec;588(7839):682-687
pubmed: 33045718
Sci Transl Med. 2021 May 12;13(593):
pubmed: 33820835
Elife. 2021 Aug 02;10:
pubmed: 34338634
Nat Commun. 2020 Sep 10;11(1):4528
pubmed: 32913273
Nat Protoc. 2021 Jun;16(6):3114-3140
pubmed: 33893470
Cell. 2020 Apr 16;181(2):271-280.e8
pubmed: 32142651
Proteins. 2022 May;90(5):1044-1053
pubmed: 34375467
Science. 2020 Dec 18;370(6523):1473-1479
pubmed: 33154106
Nature. 2020 May;581(7807):215-220
pubmed: 32225176
Nat Commun. 2020 Nov 4;11(1):5588
pubmed: 33149112
Nature. 2021 May;593(7857):130-135
pubmed: 33684923