Towards smart and sustainable development of modern berry cultivars in Europe.

BreedingValue project berry breeding consumer preference genomics image analysis metabolomics plant genetic resources trait/genotype association

Journal

The Plant journal : for cell and molecular biology
ISSN: 1365-313X
Titre abrégé: Plant J
Pays: England
ID NLM: 9207397

Informations de publication

Date de publication:
09 2022
Historique:
revised: 15 06 2022
received: 04 04 2022
accepted: 22 06 2022
pubmed: 26 6 2022
medline: 9 9 2022
entrez: 25 6 2022
Statut: ppublish

Résumé

Fresh berries are a popular and important component of the human diet. The demand for high-quality berries and sustainable production methods is increasing globally, challenging breeders to develop modern berry cultivars that fulfill all desired characteristics. Since 1994, research projects have characterized genetic resources, developed modern tools for high-throughput screening, and published data in publicly available repositories. However, the key findings of different disciplines are rarely linked together, and only a limited range of traits and genotypes has been investigated. The Horizon2020 project BreedingValue will address these challenges by studying a broader panel of strawberry, raspberry and blueberry genotypes in detail, in order to recover the lost genetic diversity that has limited the aroma and flavor intensity of recent cultivars. We will combine metabolic analysis with sensory panel tests and surveys to identify the key components of taste, flavor and aroma in berries across Europe, leading to a high-resolution map of quality requirements for future berry cultivars. Traits linked to berry yields and the effect of environmental stress will be investigated using modern image analysis methods and modeling. We will also use genetic analysis to determine the genetic basis of complex traits for the development and optimization of modern breeding technologies, such as molecular marker arrays, genomic selection and genome-wide association studies. Finally, the results, raw data and metadata will be made publicly available on the open platform Germinate in order to meet FAIR data principles and provide the basis for sustainable research in the future.

Identifiants

pubmed: 35751152
doi: 10.1111/tpj.15876
doi:

Types de publication

Journal Article Review Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1238-1251

Informations de copyright

© 2022 The Authors. The Plant Journal published by Society for Experimental Biology and John Wiley & Sons Ltd.

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Auteurs

Elisa Senger (E)

Institute of Bio- and Geosciences, IBG-4 Bioinformatics, BioSC, CEPLAS, Forschungszentrum Jülich, Jülich, Germany.

Sonia Osorio (S)

Departamento de Biología Molecular y Bioquímica, Instituto de Hortofruticultura Subtropical y Mediterránea 'La Mayora', Universidad de Málaga-Consejo Superior de Investigaciones Científicas, Campus de Teatinos, Málaga, Spain.

Klaus Olbricht (K)

Hansabred GmbH & Co. KG, Dresden, Germany.

Paul Shaw (P)

Department of Information and Computational Sciences, The James Hutton Institute, Invergowrie, Scotland, UK.

Béatrice Denoyes (B)

Université de Bordeaux, UMR BFP, INRAE, Villenave d'Ornon, France.

Jahn Davik (J)

Department of Molecular Plant Biology, Norwegian Institute of Bioeconomy Research (NIBIO), Ås, Norway.

Stefano Predieri (S)

Bio-Agrofood Department, Institute for Bioeconomy, IBE-CNR, Italian National Research Council, Bologna, Italy.

Saila Karhu (S)

Natural Resources Institute Finland (Luke), Turku, Finland.

Sebastian Raubach (S)

Department of Information and Computational Sciences, The James Hutton Institute, Invergowrie, Scotland, UK.

Nico Lippi (N)

Bio-Agrofood Department, Institute for Bioeconomy, IBE-CNR, Italian National Research Council, Bologna, Italy.

Monika Höfer (M)

Institute of Breeding Research on Fruit Crops, Federal Research Centre for Cultivated Plants (JKI), Dresden, Germany.

Helen Cockerton (H)

Genetics, Genomics and Breeding Department, NIAB, East Malling, UK.

Christophe Pradal (C)

CIRAD and UMR AGAP Institute, Montpellier, France.
INRIA and LIRMM, University Montpellier, CNRS, Montpellier, France.

Ebru Kafkas (E)

Department of Horticulture, Faculty of Agriculture, Çukurova University, Balcalı, Adana, Turkey.

Suzanne Litthauer (S)

Genetics, Genomics and Breeding Department, NIAB, East Malling, UK.

Iraida Amaya (I)

Unidad Asociada deI + D + i IFAPA-CSIC Biotecnología y Mejora en Fresa, Málaga, Spain.
Laboratorio de Genómica y Biotecnología, Centro IFAPA de Málaga, Instituto Andaluz de Investigación y Formación Agraria y Pesquera, Málaga, Spain.

Björn Usadel (B)

Institute of Bio- and Geosciences, IBG-4 Bioinformatics, BioSC, CEPLAS, Forschungszentrum Jülich, Jülich, Germany.
Institute for Biological Data Science, Heinrich-Heine University Düsseldorf, Düsseldorf, Germany.

Bruno Mezzetti (B)

Department of Agricultural, Food and Environmental Sciences, Università Politecnica delle Marche, Ancona, Italy.

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