Parallel tempering strategies for model-based landmark detection on shapes.
Markov chain Monte Carlo
elastic metric
landmarks
parallel tempering
shape analysis
Journal
Communications in statistics: Simulation and computation
ISSN: 0361-0918
Titre abrégé: Commun Stat Simul Comput
Pays: United States
ID NLM: 101570578
Informations de publication
Date de publication:
2022
2022
Historique:
entrez:
27
6
2022
pubmed:
28
6
2022
medline:
28
6
2022
Statut:
ppublish
Résumé
In the field of shape analysis, landmarks are defined as a low-dimensional, representative set of important features of an object's shape that can be used to identify regions of interest along its outline. An important problem is to infer the number and arrangement of landmarks, given a set of shapes drawn from a population. One proposed approach defines a posterior distribution over landmark locations by associating each landmark configuration with a linear reconstruction of the shape. In practice, sampling from the resulting posterior density is challenging using standard Markov chain Monte Carlo (MCMC) methods because multiple configurations of landmarks can describe a complex shape similarly well, manifesting in a multi-modal posterior with well-separated modes. Standard MCMC methods traverse multi-modal posteriors poorly and, even when multiple modes are identified, the relative amount of time spent in each one can be misleading. We apply new advances in the parallel tempering literature to the problem of landmark detection, providing guidance on implementation generalized to other applications within shape analysis. Proposal adaptation is used during burn-in to ensure efficient traversal of the parameter space while maintaining computational efficiency. We demonstrate this algorithm on simulated data and common shapes obtained from computer vision scenes.
Identifiants
pubmed: 35755486
doi: 10.1080/03610918.2019.1670843
pmc: PMC9216184
mid: NIHMS1543892
doi:
Types de publication
Journal Article
Langues
eng
Pagination
1415-1435Subventions
Organisme : NCI NIH HHS
ID : R37 CA214955
Pays : United States
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