Spectral organ fingerprints for machine learning-based intraoperative tissue classification with hyperspectral imaging in a porcine model.
Journal
Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288
Informations de publication
Date de publication:
30 06 2022
30 06 2022
Historique:
received:
04
02
2022
accepted:
16
06
2022
entrez:
30
6
2022
pubmed:
1
7
2022
medline:
6
7
2022
Statut:
epublish
Résumé
Visual discrimination of tissue during surgery can be challenging since different tissues appear similar to the human eye. Hyperspectral imaging (HSI) removes this limitation by associating each pixel with high-dimensional spectral information. While previous work has shown its general potential to discriminate tissue, clinical translation has been limited due to the method's current lack of robustness and generalizability. Specifically, the scientific community is lacking a comprehensive spectral tissue atlas, and it is unknown whether variability in spectral reflectance is primarily explained by tissue type rather than the recorded individual or specific acquisition conditions. The contribution of this work is threefold: (1) Based on an annotated medical HSI data set (9059 images from 46 pigs), we present a tissue atlas featuring spectral fingerprints of 20 different porcine organs and tissue types. (2) Using the principle of mixed model analysis, we show that the greatest source of variability related to HSI images is the organ under observation. (3) We show that HSI-based fully-automatic tissue differentiation of 20 organ classes with deep neural networks is possible with high accuracy (> 95%). We conclude from our study that automatic tissue discrimination based on HSI data is feasible and could thus aid in intraoperative decisionmaking and pave the way for context-aware computer-assisted surgery systems and autonomous robotics.
Identifiants
pubmed: 35773276
doi: 10.1038/s41598-022-15040-w
pii: 10.1038/s41598-022-15040-w
pmc: PMC9247052
doi:
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
11028Subventions
Organisme : European Research Council
ID : 101002198
Pays : International
Informations de copyright
© 2022. The Author(s).
Références
J Biomed Opt. 2015 Dec;20(12):121303
pubmed: 26220210
Scand J Clin Lab Invest. 2000 Nov;60(7):509-40
pubmed: 11202048
IEEE Trans Biomed Eng. 2010 Aug;57(8):2011-7
pubmed: 20460203
Br J Pharmacol. 2010 Aug;160(7):1577-9
pubmed: 20649561
Surg Endosc. 2013 Oct;27(10):3663-70
pubmed: 23549772
J Low Genit Tract Dis. 2001 Apr;5(2):65-72
pubmed: 17043578
Georgian Med News. 2017 Sep;(270):75-81
pubmed: 28972488
Med Image Anal. 2020 Jul;63:101699
pubmed: 32375102
Biotechniques. 2003 Feb;34(2):408-13
pubmed: 12613264
Molecules. 2019 Nov 17;24(22):
pubmed: 31744187
Dis Esophagus. 2019 Dec 13;32(10):1
pubmed: 31076764
Chirurg. 2020 Mar;91(3):216-221
pubmed: 31965197
J Biomed Opt. 2012 Jul;17(7):076005
pubmed: 22894488
Surg Innov. 2011 Dec;18(4):329-37
pubmed: 21307018
J Pharm Biomed Anal. 2012 Nov;70:691-9
pubmed: 22840977
Biomed Opt Express. 2019 Nov 19;10(12):6370-6389
pubmed: 31853405
Surg Endosc. 2021 Dec;35(12):7049-7057
pubmed: 33398570
Biopolymers. 2021 Apr;112(4):e23400
pubmed: 32937683
Perioper Med (Lond). 2021 Dec 1;10(1):42
pubmed: 34847953
Biomed Tech (Berl). 2018 Oct 25;63(5):557-566
pubmed: 30218598
J Biomed Opt. 2012 Nov;17(11):116025
pubmed: 23214186
Phys Med Biol. 2013 Jun 7;58(11):R37-61
pubmed: 23666068
J Biomed Opt. 2016 Oct 1;21(10):104003
pubmed: 27792808
Physiol Meas. 2016 Nov;37(11):2064-2078
pubmed: 27786164
J Surg Oncol. 2018 Aug;118(2):265-282
pubmed: 30076724
Int J Comput Assist Radiol Surg. 2019 Oct;14(10):1651-1661
pubmed: 31222672
Exp Physiol. 2008 Jan;93(1):128-32
pubmed: 17981931
Photoacoustics. 2022 Mar 05;26:100341
pubmed: 35371919
Analyst. 2013 Jul 21;138(14):4058-65
pubmed: 23662300
Microvasc Res. 2018 Mar;116:64-70
pubmed: 29107094
Clin Hemorheol Microcirc. 2019;73(1):3-17
pubmed: 31561343
Clin Hemorheol Microcirc. 2017;67(3-4):467-474
pubmed: 28885215
IEEE Trans Biomed Eng. 2018 Nov;65(11):2649-2659
pubmed: 29993443
Int J Comput Assist Radiol Surg. 2016 Jun;11(6):909-17
pubmed: 27142459
Int J Surg Case Rep. 2019;62:108-111
pubmed: 31493663
Chirurg. 2020 Feb;91(2):150-159
pubmed: 31435721
J Med Imaging (Bellingham). 2017 Jan;4(1):015001
pubmed: 28149926
Int J Colorectal Dis. 2019 Apr;34(4):731-739
pubmed: 30712079
Biomedicines. 2021 Dec 03;9(12):
pubmed: 34944645
J Biomed Opt. 2014 Jan;19(1):10901
pubmed: 24441941
Surg Endosc. 2020 Apr;34(4):1736-1744
pubmed: 31309313
Sci Rep. 2018 Sep 14;8(1):13797
pubmed: 30218087
J Biomed Opt. 2017 Mar 1;22(3):35009
pubmed: 28327962
IEEE Trans Biomed Eng. 1988 Oct;35(10):842-50
pubmed: 3056848
Surgery. 2020 Jul;168(1):178-184
pubmed: 32223983
Nat Commun. 2019 Nov 28;10(1):5416
pubmed: 31780648
Handchir Mikrochir Plast Chir. 2019 Jun;51(3):171-176
pubmed: 31167277
Annu Int Conf IEEE Eng Med Biol Soc. 2019 Jul;2019:1851-1854
pubmed: 31946258
Mar Genomics. 2020 Jun;51:100723
pubmed: 31784353
Surg Endosc. 2018 Oct;32(10):4216-4227
pubmed: 29603002
Surg Endosc. 2019 Nov;33(11):3775-3782
pubmed: 30675658