Spectral organ fingerprints for machine learning-based intraoperative tissue classification with hyperspectral imaging in a porcine model.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
30 06 2022
Historique:
received: 04 02 2022
accepted: 16 06 2022
entrez: 30 6 2022
pubmed: 1 7 2022
medline: 6 7 2022
Statut: epublish

Résumé

Visual discrimination of tissue during surgery can be challenging since different tissues appear similar to the human eye. Hyperspectral imaging (HSI) removes this limitation by associating each pixel with high-dimensional spectral information. While previous work has shown its general potential to discriminate tissue, clinical translation has been limited due to the method's current lack of robustness and generalizability. Specifically, the scientific community is lacking a comprehensive spectral tissue atlas, and it is unknown whether variability in spectral reflectance is primarily explained by tissue type rather than the recorded individual or specific acquisition conditions. The contribution of this work is threefold: (1) Based on an annotated medical HSI data set (9059 images from 46 pigs), we present a tissue atlas featuring spectral fingerprints of 20 different porcine organs and tissue types. (2) Using the principle of mixed model analysis, we show that the greatest source of variability related to HSI images is the organ under observation. (3) We show that HSI-based fully-automatic tissue differentiation of 20 organ classes with deep neural networks is possible with high accuracy (> 95%). We conclude from our study that automatic tissue discrimination based on HSI data is feasible and could thus aid in intraoperative decisionmaking and pave the way for context-aware computer-assisted surgery systems and autonomous robotics.

Identifiants

pubmed: 35773276
doi: 10.1038/s41598-022-15040-w
pii: 10.1038/s41598-022-15040-w
pmc: PMC9247052
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

11028

Subventions

Organisme : European Research Council
ID : 101002198
Pays : International

Informations de copyright

© 2022. The Author(s).

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Auteurs

Alexander Studier-Fischer (A)

Department of General, Visceral, and Transplantation Surgery, Heidelberg University Hospital, Im Neuenheimer Feld 420, 69120, Heidelberg, Germany.

Silvia Seidlitz (S)

Division of Intelligent Medical Systems, German Cancer Research Center (DKFZ), Heidelberg, Germany.
HIDSS4Health - Helmholtz Information and Data Science School for Health, Karlsruhe, Heidelberg, Germany.

Jan Sellner (J)

Division of Intelligent Medical Systems, German Cancer Research Center (DKFZ), Heidelberg, Germany.
HIDSS4Health - Helmholtz Information and Data Science School for Health, Karlsruhe, Heidelberg, Germany.
Division of Medical Image Computing, German Cancer Research Center (DKFZ), Heidelberg, Germany.

Berkin Özdemir (B)

Department of General, Visceral, and Transplantation Surgery, Heidelberg University Hospital, Im Neuenheimer Feld 420, 69120, Heidelberg, Germany.

Manuel Wiesenfarth (M)

Division of Biostatistics, German Cancer Research Center (DKFZ), Heidelberg, Germany.

Leonardo Ayala (L)

Division of Intelligent Medical Systems, German Cancer Research Center (DKFZ), Heidelberg, Germany.

Jan Odenthal (J)

Department of General, Visceral, and Transplantation Surgery, Heidelberg University Hospital, Im Neuenheimer Feld 420, 69120, Heidelberg, Germany.

Samuel Knödler (S)

Department of General, Visceral, and Transplantation Surgery, Heidelberg University Hospital, Im Neuenheimer Feld 420, 69120, Heidelberg, Germany.

Karl Friedrich Kowalewski (KF)

Department of Urology, Medical Faculty of Mannheim, University of Heidelberg, Mannheim, Germany.

Caelan Max Haney (CM)

Department of General, Visceral, and Transplantation Surgery, Heidelberg University Hospital, Im Neuenheimer Feld 420, 69120, Heidelberg, Germany.

Isabella Camplisson (I)

Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, USA.

Maximilian Dietrich (M)

Department of Anesthesiology, Heidelberg University Hospital, Heidelberg, Germany.

Karsten Schmidt (K)

Department of Anesthesiology and Intensive Care Medicine, Essen University Hospital, Essen, Germany.

Gabriel Alexander Salg (GA)

Department of General, Visceral, and Transplantation Surgery, Heidelberg University Hospital, Im Neuenheimer Feld 420, 69120, Heidelberg, Germany.

Hannes Götz Kenngott (HG)

Department of General, Visceral, and Transplantation Surgery, Heidelberg University Hospital, Im Neuenheimer Feld 420, 69120, Heidelberg, Germany.

Tim Julian Adler (TJ)

Division of Intelligent Medical Systems, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Faculty of Mathematics and Computer Science, Heidelberg University, Heidelberg, Germany.

Nicholas Schreck (N)

Division of Biostatistics, German Cancer Research Center (DKFZ), Heidelberg, Germany.

Annette Kopp-Schneider (A)

Division of Biostatistics, German Cancer Research Center (DKFZ), Heidelberg, Germany.

Klaus Maier-Hein (K)

Division of Intelligent Medical Systems, German Cancer Research Center (DKFZ), Heidelberg, Germany.
HIDSS4Health - Helmholtz Information and Data Science School for Health, Karlsruhe, Heidelberg, Germany.
Division of Medical Image Computing, German Cancer Research Center (DKFZ), Heidelberg, Germany.

Lena Maier-Hein (L)

Division of Intelligent Medical Systems, German Cancer Research Center (DKFZ), Heidelberg, Germany.
HIDSS4Health - Helmholtz Information and Data Science School for Health, Karlsruhe, Heidelberg, Germany.
Division of Medical Image Computing, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Faculty of Mathematics and Computer Science, Heidelberg University, Heidelberg, Germany.

Beat Peter Müller-Stich (BP)

Department of General, Visceral, and Transplantation Surgery, Heidelberg University Hospital, Im Neuenheimer Feld 420, 69120, Heidelberg, Germany.

Felix Nickel (F)

Department of General, Visceral, and Transplantation Surgery, Heidelberg University Hospital, Im Neuenheimer Feld 420, 69120, Heidelberg, Germany. felix.nickel@med.uni-heidelberg.de.
HIDSS4Health - Helmholtz Information and Data Science School for Health, Karlsruhe, Heidelberg, Germany. felix.nickel@med.uni-heidelberg.de.

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