Structure and Protein-Protein Interactions of Ice Nucleation Proteins Drive Their Activity.

atmospheric bacteria ice-nucleating proteins protein activity protein structure protein–protein interactions

Journal

Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977

Informations de publication

Date de publication:
2022
Historique:
received: 09 02 2022
accepted: 16 05 2022
entrez: 5 7 2022
pubmed: 6 7 2022
medline: 6 7 2022
Statut: epublish

Résumé

Microbially-produced ice nucleating proteins (INpro) are unique molecular structures with the highest known catalytic efficiency for ice formation. Airborne microorganisms utilize these proteins to enhance their survival by reducing their atmospheric residence times. INpro also have critical environmental effects including impacts on the atmospheric water cycle, through their role in cloud and precipitation formation, as well as frost damage on crops. INpro are ubiquitously present in the atmosphere where they are emitted from diverse terrestrial and marine environments. Even though bacterial genes encoding INpro have been discovered and sequenced decades ago, the details of how the INpro molecular structure and oligomerization foster their unique ice-nucleation activity remain elusive. Using machine-learning based software AlphaFold 2 and trRosetta, we obtained and analysed the first

Identifiants

pubmed: 35783412
doi: 10.3389/fmicb.2022.872306
pmc: PMC9247515
doi:

Types de publication

Journal Article

Langues

eng

Pagination

872306

Informations de copyright

Copyright © 2022 Hartmann, Ling, Dreyer, Zipori, Finster, Grawe, Jensen, Borck, Reicher, Drace, Niedermeier, Jones, Hoffmann, Wex, Rudich, Boesen and Šantl-Temkiv.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

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Auteurs

Susan Hartmann (S)

Institute for Tropospheric Research, Leipzig, Germany.

Meilee Ling (M)

Department of Biology, Microbiology Section, Aarhus University, Aarhus, Denmark.
Department of Physics and Astronomy, Stellar Astrophysics Centre, Aarhus University, Aarhus, Denmark.
Department of Molecular Biology and Genetics, Section for Protein Science, Aarhus University, Aarhus, Denmark.

Lasse S A Dreyer (LSA)

Department of Molecular Biology and Genetics, Section for Protein Science, Aarhus University, Aarhus, Denmark.

Assaf Zipori (A)

Department of Earth and Planetary Sciences, Weizmann Institute of Science, Rehovot, Israel.

Kai Finster (K)

Department of Biology, Microbiology Section, Aarhus University, Aarhus, Denmark.
Department of Physics and Astronomy, Stellar Astrophysics Centre, Aarhus University, Aarhus, Denmark.

Sarah Grawe (S)

Institute for Tropospheric Research, Leipzig, Germany.

Lasse Z Jensen (LZ)

Department of Biology, Microbiology Section, Aarhus University, Aarhus, Denmark.
Department of Physics and Astronomy, Stellar Astrophysics Centre, Aarhus University, Aarhus, Denmark.
Department of Molecular Biology and Genetics, Section for Protein Science, Aarhus University, Aarhus, Denmark.

Stella Borck (S)

Department of Biology, Microbiology Section, Aarhus University, Aarhus, Denmark.
Department of Physics and Astronomy, Stellar Astrophysics Centre, Aarhus University, Aarhus, Denmark.
Department of Molecular Biology and Genetics, Section for Protein Science, Aarhus University, Aarhus, Denmark.

Naama Reicher (N)

Department of Earth and Planetary Sciences, Weizmann Institute of Science, Rehovot, Israel.

Taner Drace (T)

Department of Molecular Biology and Genetics, Section for Protein Science, Aarhus University, Aarhus, Denmark.

Dennis Niedermeier (D)

Institute for Tropospheric Research, Leipzig, Germany.

Nykola C Jones (NC)

Department of Physics and Astronomy, The Institute for Storage Ring Facilities, Aarhus University, Aarhus, Denmark.

Søren V Hoffmann (SV)

Department of Physics and Astronomy, The Institute for Storage Ring Facilities, Aarhus University, Aarhus, Denmark.

Heike Wex (H)

Institute for Tropospheric Research, Leipzig, Germany.

Yinon Rudich (Y)

Department of Earth and Planetary Sciences, Weizmann Institute of Science, Rehovot, Israel.

Thomas Boesen (T)

Department of Molecular Biology and Genetics, Section for Protein Science, Aarhus University, Aarhus, Denmark.
Interdisciplinary Nanoscience Center and Center for Electromicrobiology, Aarhus University, Aarhus, Denmark.

Tina Šantl-Temkiv (T)

Department of Biology, Microbiology Section, Aarhus University, Aarhus, Denmark.
Department of Physics and Astronomy, Stellar Astrophysics Centre, Aarhus University, Aarhus, Denmark.

Classifications MeSH