Metagenomics Approaches to Investigate the Neonatal Gut Microbiome.
breastfeeding
colonization
delivery
dysbiosis
metagenomics
microbiome
neonatal microbiota
womb sterile
Journal
Frontiers in pediatrics
ISSN: 2296-2360
Titre abrégé: Front Pediatr
Pays: Switzerland
ID NLM: 101615492
Informations de publication
Date de publication:
2022
2022
Historique:
received:
28
02
2022
accepted:
23
05
2022
entrez:
8
7
2022
pubmed:
9
7
2022
medline:
9
7
2022
Statut:
epublish
Résumé
Early infancy is critical for the development of an infant's gut flora. Many factors can influence microbiota development during the pre- and postnatal periods, including maternal factors, antibiotic exposure, mode of delivery, dietary patterns, and feeding type. Therefore, investigating the connection between these variables and host and microbiome interactions in neonatal development would be of great interest. As the "unculturable" era of microbiome research gives way to an intrinsically multidisciplinary field, microbiome research has reaped the advantages of technological advancements in next-generation sequencing, particularly 16S rRNA gene amplicon and shotgun sequencing, which have considerably expanded our knowledge about gut microbiota development during early life. Using omics approaches to explore the neonatal microbiome may help to better understand the link between the microbiome and newborn diseases. Herein, we summarized the metagenomics methods and tools used to advance knowledge on the neonatal microbiome origin and evolution and how the microbiome shapes early and late individuals' lives for health and disease. The way to overcome limitations in neonatal microbiome studies will be discussed.
Identifiants
pubmed: 35799697
doi: 10.3389/fped.2022.886627
pmc: PMC9253679
doi:
Types de publication
Journal Article
Review
Langues
eng
Pagination
886627Informations de copyright
Copyright © 2022 Boudar, Sehli, El Janahi, Al Idrissi, Hamdi, Dini, Brim, Amzazi, Nejjari, Lloyd-Puryear and Ghazal.
Déclaration de conflit d'intérêts
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
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