An MRI-based radiomics model to predict clear cell renal cell carcinoma growth rate classes in patients with von Hippel-Lindau syndrome.


Journal

Abdominal radiology (New York)
ISSN: 2366-0058
Titre abrégé: Abdom Radiol (NY)
Pays: United States
ID NLM: 101674571

Informations de publication

Date de publication:
10 2022
Historique:
received: 11 04 2022
accepted: 03 07 2022
revised: 28 06 2022
pubmed: 23 7 2022
medline: 14 9 2022
entrez: 22 7 2022
Statut: ppublish

Résumé

Upfront knowledge of tumor growth rates of clear cell renal cell carcinoma in von Hippel-Lindau syndrome (VHL) patients can allow for a more personalized approach to either surveillance imaging frequency or surgical planning. In this study, we implement a machine learning algorithm utilizing radiomic features of renal tumors identified on baseline magnetic resonance imaging (MRI) in VHL patients to predict the volumetric growth rate category of these tumors. A total of 73 VHL patients with 173 pathologically confirmed Clear Cell Renal Cell Carcinoma (ccRCCs) underwent MRI at least at two different time points between 2015 and 2021. Each tumor was manually segmented in excretory phase contrast T1 weighed MRI and co-registered on pre-contrast, corticomedullary and nephrographic phases. Radiomic features and volumetric data from each tumor were extracted using the PyRadiomics library in Python (4544 total features). Tumor doubling time (DT) was calculated and patients were divided into two groups: DT <  = 1 year and DT > 1 year. Random forest classifier (RFC) was used to predict the DT category. To measure prediction performance, the cohort was randomly divided into 100 training and test sets (80% and 20%). Model performance was evaluated using area under curve of receiver operating characteristic curve (AUC-ROC), as well as accuracy, F1, precision and recall, reported as percentages with 95% confidence intervals (CIs). The average age of patients was 47.2 ± 10.3 years. Mean interval between MRIs for each patient was 1.3 years. Tumors included in this study were categorized into 155 Grade 2; 16 Grade 3; and 2 Grade 4. Mean accuracy of RFC model was 79.0% [67.4-90.6] and mean AUC-ROC of 0.795 [0.608-0.988]. The accuracy for predicting DT classes was not different among the MRI sequences (P-value = 0.56). Here we demonstrate the utility of machine learning in accurately predicting the renal tumor growth rate category of VHL patients based on radiomic features extracted from different T1-weighted pre- and post-contrast MRI sequences.

Identifiants

pubmed: 35869307
doi: 10.1007/s00261-022-03610-5
pii: 10.1007/s00261-022-03610-5
pmc: PMC10645140
mid: NIHMS1939255
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

3554-3562

Subventions

Organisme : Intramural NIH HHS
ID : ZIA BC011038
Pays : United States
Organisme : Intramural NIH HHS
ID : ZIH BC012032
Pays : United States

Commentaires et corrections

Type : CommentIn

Informations de copyright

© 2022. This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply.

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Auteurs

Pouria Yazdian Anari (PY)

Radiology and Imaging Sciences, Clinical Center (CC), National Institutes of Health, Bethesda, MD, USA.

Nathan Lay (N)

Artificial Intelligence Resource, Clinical Center, National Institutes of Health, Bethesda, MD, USA.

Nikhil Gopal (N)

Urologic Oncology Branch, Clinical Center, National Cancer Institute (NCI), National Institutes of Health, Bethesda, MD, USA.

Aditi Chaurasia (A)

Radiology and Imaging Sciences, Clinical Center (CC), National Institutes of Health, Bethesda, MD, USA.

Safa Samimi (S)

Radiology and Imaging Sciences, Clinical Center (CC), National Institutes of Health, Bethesda, MD, USA.

Stephanie Harmon (S)

Artificial Intelligence Resource, Clinical Center, National Institutes of Health, Bethesda, MD, USA.

Fatemeh Dehghani Firouzabadi (FD)

Radiology and Imaging Sciences, Clinical Center (CC), National Institutes of Health, Bethesda, MD, USA.

Maria J Merino (MJ)

Pathology Department, Clinical Center, National Cancer Institutes (NCI), National Institutes of Health, Bethesda, MD, USA.

Paul Wakim (P)

Biostatistics and Clinical Epidemiology Service, Clinical Center, National Institutes of Health, Bethesda, MD, USA.

Evrim Turkbey (E)

Radiology and Imaging Sciences, Clinical Center (CC), National Institutes of Health, Bethesda, MD, USA.

Elizabeth C Jones (EC)

Radiology and Imaging Sciences, Clinical Center (CC), National Institutes of Health, Bethesda, MD, USA.

Mark W Ball (MW)

Urologic Oncology Branch, Clinical Center, National Cancer Institute (NCI), National Institutes of Health, Bethesda, MD, USA.

Baris Turkbey (B)

Artificial Intelligence Resource, Clinical Center, National Institutes of Health, Bethesda, MD, USA.

W Marston Linehan (WM)

Urologic Oncology Branch, Clinical Center, National Cancer Institute (NCI), National Institutes of Health, Bldg. 10, Room 2 W-5940 and Room 1-5940, 10 Center Drive, Bethesda, MD, 20892, USA. linehanm@mail.nih.gov.

Ashkan A Malayeri (AA)

Radiology and Imaging Sciences, Clinical Center (CC), National Institutes of Health, 10 Center Drive, Bethesda, MD, 20892-1109, USA. ashkan.malayeri@nih.gov.

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