An isothermal lab-on-phone test for easy molecular diagnosis of SARS-CoV-2 near patients and in less than 1 hour.
COVID-19
LAMP assay
Nucleic acid amplification techniques
Point-of-care testing
Real-time PCR
SARS-CoV-2
Journal
International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases
ISSN: 1878-3511
Titre abrégé: Int J Infect Dis
Pays: Canada
ID NLM: 9610933
Informations de publication
Date de publication:
Oct 2022
Oct 2022
Historique:
received:
23
06
2022
revised:
29
06
2022
accepted:
15
07
2022
pubmed:
26
7
2022
medline:
5
10
2022
entrez:
25
7
2022
Statut:
ppublish
Résumé
The performance of a new point-of-care CE-IVD-marked isothermal lab-on-phone COVID-19 assay was assessed in comparison to a gold standard real-time reverse transcriptase-PCR method. The study was conducted following a nonprobability sampling of ≥16-year-old volunteers from three different laboratories, using direct mouthwash (N = 24) or nasopharyngeal (N = 191) clinical samples. The assay demonstrated 95.19% sensitivity and 100% specificity for detection of SARS-CoV-2 in direct nasopharyngeal crude samples and 78.95% sensitivity and 100% specificity in direct mouthwash crude samples. It also successfully detected currently predominant SARS-CoV-2 variants of concern (Beta B.1.351, Delta B.1.617.2, and Omicron B.1.1.529) and demonstrated to be inert against potential cross-reactions of other common respiratory pathogens that cause infections that present similar symptoms to COVID-19. This lab-on-phone pocket-sized assay relies on an isothermal amplification of SARS-CoV-2's N and E genes, taking just 50 minutes from sample to result, with only 2 minutes of hands-on time. It presents good performance when using direct nasopharyngeal crude samples, enabling a low-cost, real-time, rapid, and accurate identification of SARS-CoV-2 infections at the point of care, which is important for both clinical management and population screening, as a tool to break the chain of transmission of COVID-19 pandemic, especially in low-resources environments.
Identifiants
pubmed: 35878801
pii: S1201-9712(22)00436-2
doi: 10.1016/j.ijid.2022.07.042
pmc: PMC9307284
pii:
doi:
Substances chimiques
Mouthwashes
0
RNA, Viral
0
RNA-Directed DNA Polymerase
EC 2.7.7.49
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
1-8Informations de copyright
Copyright © 2022 The Authors. Published by Elsevier Ltd.. All rights reserved.
Déclaration de conflit d'intérêts
Conflict of interest declaration G. Doria, C. Clemente, E. Coelho, J. Colaço, R. Crespo, and O. Flores are employed by STAB VIDA Lda, the developer and manufacturer of the Doctor Vida® pocket CE-IVD system described in this manuscript.
Références
JAMA. 2020 Apr 7;323(13):1239-1242
pubmed: 32091533
J Biomol Tech. 2021 Sep;32(3):206-213
pubmed: 35027878
Malays J Med Sci. 2018 Feb;25(1):121-123
pubmed: 29599643
Viruses. 2020 Dec 10;12(12):
pubmed: 33322035
Biotechniques. 2021 Mar;70(3):167-174
pubmed: 33535813
Cancer Discov. 2021 Feb;11(2):233-236
pubmed: 33355178
BMC Infect Dis. 2021 Aug 10;21(1):798
pubmed: 34376187
PLoS One. 2021 May 5;16(5):e0250202
pubmed: 33951060
Proc Natl Acad Sci U S A. 2020 Sep 15;117(37):22727-22735
pubmed: 32868442
Biotechniques. 2020 Sep;69(3):178-185
pubmed: 32635743
Clin Infect Dis. 2021 Jan 27;72(2):340-350
pubmed: 33501974
Proc Natl Acad Sci U S A. 2021 Aug 24;118(34):
pubmed: 34376550
J Autoimmun. 2020 May;109:102433
pubmed: 32113704
Int J Infect Dis. 2021 Jan;102:299-302
pubmed: 33130202