Mortality Prediction Analysis among COVID-19 Inpatients Using Clinical Variables and Deep Learning Chest Radiography Imaging Features.

COVID chest radiographs computer-aided diagnosis/prognosis explainable AI machine learning multi-modal analysis transfer learning

Journal

Tomography (Ann Arbor, Mich.)
ISSN: 2379-139X
Titre abrégé: Tomography
Pays: Switzerland
ID NLM: 101671170

Informations de publication

Date de publication:
13 07 2022
Historique:
received: 11 05 2022
revised: 04 07 2022
accepted: 07 07 2022
entrez: 27 7 2022
pubmed: 28 7 2022
medline: 29 7 2022
Statut: epublish

Résumé

The emergence of the COVID-19 pandemic over a relatively brief interval illustrates the need for rapid data-driven approaches to facilitate clinical decision making. We examined a machine learning process to predict inpatient mortality among COVID-19 patients using clinical and chest radiographic data. Modeling was performed with a de-identified dataset of encounters prior to widespread vaccine availability. Non-imaging predictors included demographics, pre-admission clinical history, and past medical history variables. Imaging features were extracted from chest radiographs by applying a deep convolutional neural network with transfer learning. A multi-layer perceptron combining 64 deep learning features from chest radiographs with 98 patient clinical features was trained to predict mortality. The Local Interpretable Model-Agnostic Explanations (LIME) method was used to explain model predictions. Non-imaging data alone predicted mortality with an ROC-AUC of 0.87 ± 0.03 (mean ± SD), while the addition of imaging data improved prediction slightly (ROC-AUC: 0.91 ± 0.02). The application of LIME to the combined imaging and clinical model found HbA1c values to contribute the most to model prediction (17.1 ± 1.7%), while imaging contributed 8.8 ± 2.8%. Age, gender, and BMI contributed 8.7%, 8.2%, and 7.1%, respectively. Our findings demonstrate a viable explainable AI approach to quantify the contributions of imaging and clinical data to COVID mortality predictions.

Identifiants

pubmed: 35894016
pii: tomography8040151
doi: 10.3390/tomography8040151
pmc: PMC9326627
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Pagination

1791-1803

Subventions

Organisme : NIH HHS
ID : 75N92020D00021
Pays : United States

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Auteurs

Xuan V Nguyen (XV)

Laboratory for Augmented Intelligence in Imaging, Department of Radiology, The Ohio State University College of Medicine, Columbus, OH 43210, USA.

Engin Dikici (E)

Laboratory for Augmented Intelligence in Imaging, Department of Radiology, The Ohio State University College of Medicine, Columbus, OH 43210, USA.

Sema Candemir (S)

Laboratory for Augmented Intelligence in Imaging, Department of Radiology, The Ohio State University College of Medicine, Columbus, OH 43210, USA.

Robyn L Ball (RL)

The Jackson Laboratory, Bar Harbor, ME 04609, USA.

Luciano M Prevedello (LM)

Laboratory for Augmented Intelligence in Imaging, Department of Radiology, The Ohio State University College of Medicine, Columbus, OH 43210, USA.

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Classifications MeSH