Tracking single adatoms in liquid in a transmission electron microscope.


Journal

Nature
ISSN: 1476-4687
Titre abrégé: Nature
Pays: England
ID NLM: 0410462

Informations de publication

Date de publication:
09 2022
Historique:
received: 03 07 2020
accepted: 20 07 2022
pubmed: 28 7 2022
medline: 1 10 2022
entrez: 27 7 2022
Statut: ppublish

Résumé

Single atoms or ions on surfaces affect processes from nucleation

Identifiants

pubmed: 35896149
doi: 10.1038/s41586-022-05130-0
pii: 10.1038/s41586-022-05130-0
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

942-947

Informations de copyright

© 2022. The Author(s), under exclusive licence to Springer Nature Limited.

Références

Lee, J., Yang, J., Kwon, S. G. & Hyeon, T. Nonclassical nucleation and growth of inorganic nanoparticles. Nat. Rev. Mater. 1, 16034 (2016).
doi: 10.1038/natrevmats.2016.34
Zhang, C. et al. Electrochemical and structural analysis in all-solid-state lithium batteries by analytical electron microscopy: progress and perspectives. Adv. Mater. 32, 1903747 (2020).
Wang, A., Li, J. & Zhang, T. Heterogeneous single-atom catalysis. Nat. Rev. Chem. 2, 65–81 (2018).
doi: 10.1038/s41570-018-0010-1
Qiao, B. et al. Single-atom catalysis of CO oxidation using Pt
pubmed: 21778984 doi: 10.1038/nchem.1095
Nellist, P. D. & Pennycook, S. J. Direct imaging of the atomic configuration of ultradispersed catalysts. Science 274, 413–415 (1996).
doi: 10.1126/science.274.5286.413
de Jonge, N. & Ross, F. M. Electron microscopy of specimens in liquid. Nat. Nanotechnol. 6, 695–704 (2011).
pubmed: 22020120 doi: 10.1038/nnano.2011.161
Tao, F. & Salmeron, M. In situ studies of chemistry and structure of materials in reactive environments. Science 331, 171–174 (2011).
pubmed: 21233377 doi: 10.1126/science.1197461
Ross Frances, M. Opportunities and challenges in liquid cell electron microscopy. Science 350, aaa9886 (2015).
pubmed: 26680204 doi: 10.1126/science.aaa9886
de Jonge, N., Houben, L., Dunin-Borkowski, R. E. & Ross, F. M. Resolution and aberration correction in liquid cell transmission electron microscopy. Nat. Rev. Mater. 4, 61–78 (2019).
doi: 10.1038/s41578-018-0071-2
Park, J. et al. 3D structure of individual nanocrystals in solution by electron microscopy. Science 349, 290–295 (2015).
pubmed: 26185247 doi: 10.1126/science.aab1343
Sun, P. Z. et al. Limits on gas impermeability of graphene. Nature 579, 229–232 (2020).
pubmed: 32161387 doi: 10.1038/s41586-020-2070-x
Woehl, T. J. & Abellan, P. Defining the radiation chemistry during liquid cell electron microscopy to enable visualization of nanomaterial growth and degradation dynamics. J. Microsc. 265, 135–147 (2017).
pubmed: 27918613 doi: 10.1111/jmi.12508
Cho, H. et al. The use of graphene and its derivatives for liquid-phase transmission electron microscopy of radiation-sensitive specimens. Nano Lett. 17, 414–420 (2017).
pubmed: 28026186 doi: 10.1021/acs.nanolett.6b04383
Yuk, J. M. et al. High-resolution EM of colloidal nanocrystal growth using graphene liquid cells. Science 336, 61–64 (2012).
pubmed: 22491849 doi: 10.1126/science.1217654
Textor, M. & de Jonge, N. Strategies for preparing graphene liquid cells for transmission electron microscopy. Nano Lett. 18, 3313–3321 (2018).
pubmed: 29799208 doi: 10.1021/acs.nanolett.8b01366
Rasool, H., Dunn, G., Fathalizadeh, A. & Zettl, A. Graphene-sealed Si/SiN cavities for high-resolution in situ electron microscopy of nano-confined solutions. Phys. Status Solidi B 253, 2351–2354 (2016).
doi: 10.1002/pssb.201600232
Kelly, D. J. et al. Nanometer resolution elemental mapping in graphene-based TEM liquid cells. Nano Lett. 18, 1168–1174 (2018).
pubmed: 29323499 pmcid: 5821409 doi: 10.1021/acs.nanolett.7b04713
Sun, X. et al. Facile synthesis of precious-metal single-site catalysts using organic solvents. Nat. Chem. 12, 560–567 (2020).
pubmed: 32284574 doi: 10.1038/s41557-020-0446-z
Park, J. et al. Graphene liquid cell electron microscopy: progress, applications, and perspectives. ACS Nano 15, 288–308 (2021).
pubmed: 33395264 doi: 10.1021/acsnano.0c10229
Kelly, D. et al. In situ TEM imaging of solution-phase chemical reactions using 2D-heterostructure mixing cells. Adv. Mater. 33, 2100668 (2021).
doi: 10.1002/adma.202100668
Hamer, M. J. et al. Atomic resolution imaging of CrBr
pubmed: 32786938 doi: 10.1021/acs.nanolett.0c02346
Chen, D., Zhang, X., Tang, J., Cui, H. & Li, Y. Noble metal (Pt or Au)-doped monolayer MoS
doi: 10.1007/s00339-018-1629-y
Chang, J., Larentis, S., Tutuc, E., Register, L. F. & Banerjee, S. K. Atomistic simulation of the electronic states of adatoms in monolayer MoS
doi: 10.1063/1.4870767
Wu, P., Yin, N., Li, P., Cheng, W. & Huang, M. The adsorption and diffusion behavior of noble metal adatoms (Pd, Pt, Cu, Ag and Au) on a MoS
pubmed: 28740981 doi: 10.1039/C7CP04021K
Komsa, H.-P., Kurasch, S., Lehtinen, O., Kaiser, U. & Krasheninnikov, A. V. From point to extended defects in two-dimensional MoS
doi: 10.1103/PhysRevB.88.035301
Lu, J. et al. Atomic healing of defects in transition metal dichalcogenides. Nano Lett. 15, 3524–3532 (2015).
pubmed: 25923457 doi: 10.1021/acs.nanolett.5b00952
Copetti, G. et al. Tuning MoS
doi: 10.1039/C9TC03991K
Klein, J. et al. Impact of substrate induced band tail states on the electronic and optical properties of MoS
doi: 10.1063/1.5131270
Wang, X. et al. Single-atom vacancy defect to trigger high-efficiency hydrogen evolution of MoS
pubmed: 31999446 doi: 10.1021/jacs.9b12113
Li, H. et al. Atomic structure and dynamics of single platinum atom interactions with monolayer MoS
pubmed: 28256826 doi: 10.1021/acsnano.7b00796
Schwermann, C. et al. Incorporation of oxygen atoms as a mechanism for photoluminescence enhancement of chemically treated MoS
pubmed: 29904778 doi: 10.1039/C8CP03052A
Garcia, A. et al. Analysis of electron beam damage of exfoliated MoS
pubmed: 24929924 pmcid: 4169717 doi: 10.1016/j.ultramic.2014.05.004
Hudak, B. M. et al. Directed atom-by-atom assembly of dopants in silicon. ACS Nano 12, 5873–5879 (2018).
pubmed: 29750507 doi: 10.1021/acsnano.8b02001
Susi, T., Meyer, J. C. & Kotakoski, J. Manipulating low-dimensional materials down to the level of single atoms with electron irradiation. Ultramicroscopy 180, 163–172 (2017).
pubmed: 28284704 doi: 10.1016/j.ultramic.2017.03.005
Koch, C. T. Determination of Core Structure Periodicity and Point Defect Density Along Dislocations. PhD thesis, Arizona State Univ. (2002).
Hopkinson, D. G. et al. Formation and healing of defects in atomically thin GaSe and InSe. ACS Nano 13, 5112–5123 (2019).
pubmed: 30946569 doi: 10.1021/acsnano.8b08253
Somnath, S. et al. Feature extraction via similarity search: application to atom finding and denoising in electron and scanning probe microscopy imaging. Adv. Struct. Chem. Imaging 4, 3 (2018).
pubmed: 29568723 pmcid: 5846807 doi: 10.1186/s40679-018-0052-y
Weston, A. et al. Atomic reconstruction in twisted bilayers of transition metal dichalcogenides. Nat. Nanotechnol. 15, 592–597 (2020).
pubmed: 32451502 doi: 10.1038/s41565-020-0682-9
Crocker, J. C. & Grier, D. G. Methods of digital video microscopy for colloidal studies. J. Colloid. Interf. Sci. 179, 298–310 (1996).
doi: 10.1006/jcis.1996.0217
Allan, D. et al. soft-matter/trackpy: Trackpy v0.4.2. Zenodo https://doi.org/10.5281/zenodo.3492186 (2019).
Klimeš, J., Bowler, D. R. & Michaelides, A. Chemical accuracy for the van der Waals density functional. J. Phys. Condens. Matter 22, 022201 (2009).
pubmed: 21386245 doi: 10.1088/0953-8984/22/2/022201
Kresse, G. & Furthmüller, J. Efficient iterative schemes for ab initio total-energy calculations using a plane-wave basis set. Phys. Rev. B 54, 11169–11186 (1996).
doi: 10.1103/PhysRevB.54.11169
Virtanen, P. et al. SciPy 1.0: fundamental algorithms for scientific computing in Python. Nat. Methods 17, 261–272 (2020).
pubmed: 32015543 pmcid: 7056644 doi: 10.1038/s41592-019-0686-2
Zou, Y.-C., Kelly, D. J., Clark, N. & Haigh, S. J. Data from ‘Tracking single adatoms in liquid in a transmission electron microscope’. figshare https://doi.org/10.48420/19699144 (2022).
Myung, C. W. & Schran, C. Water-ice-group/single-adatom-liquid-theory: supporting data for published paper. Zenodo https://doi.org/10.5281/zenodo.6527390 (2022).
Clark, N. Analysis code from “Tracking single adatoms in liquid in a transmission electron microscope”. figshare https://doi.org/10.48420/19699276 (2022).
Malis, T., Cheng, S. C. & Egerton, R. F. EELS log-ratio technique for specimen-thickness measurement in the TEM. J. Electron Microsc. Tech. 8, 193–200 (1988).
pubmed: 3246607 doi: 10.1002/jemt.1060080206
Arenal, R. et al. Extending the analysis of EELS spectrum-imaging data, from elemental to bond mapping in complex nanostructures. Ultramicroscopy 109, 32–38 (2008).
pubmed: 18789838 doi: 10.1016/j.ultramic.2008.07.005
Peña, F. D. L. et al. hyperspy/hyperspy: Hyperspy 1.3. Zenodo https://doi.org/10.5281/zenodo.583693 (2017).

Auteurs

Nick Clark (N)

Department of Materials, University of Manchester, Manchester, UK.
National Graphene Institute, University of Manchester, Manchester, UK.

Daniel J Kelly (DJ)

Department of Materials, University of Manchester, Manchester, UK.
National Graphene Institute, University of Manchester, Manchester, UK.

Mingwei Zhou (M)

National Graphene Institute, University of Manchester, Manchester, UK.
Department of Physics and Astronomy, University of Manchester, Manchester, UK.

Yi-Chao Zou (YC)

Department of Materials, University of Manchester, Manchester, UK.
National Graphene Institute, University of Manchester, Manchester, UK.
School of Materials Science and Engineering, Sun Yat-sen University, Guangzhou, PR China.

Chang Woo Myung (CW)

Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge, UK.

David G Hopkinson (DG)

Department of Materials, University of Manchester, Manchester, UK.
National Graphene Institute, University of Manchester, Manchester, UK.

Christoph Schran (C)

Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge, UK.

Angelos Michaelides (A)

Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge, UK.

Roman Gorbachev (R)

National Graphene Institute, University of Manchester, Manchester, UK. roman@manchester.ac.uk.
Department of Physics and Astronomy, University of Manchester, Manchester, UK. roman@manchester.ac.uk.

Sarah J Haigh (SJ)

Department of Materials, University of Manchester, Manchester, UK. sarah.haigh@manchester.ac.uk.
National Graphene Institute, University of Manchester, Manchester, UK. sarah.haigh@manchester.ac.uk.

Classifications MeSH