Room-temperature serial synchrotron crystallography of Drosophila cryptochrome.

B factors circadian clock circadian photoreceptor cryptochrome correlation filtering cryptochromes fixed-target serial synchrotron crystallography flavin adenine dinucleotide molecular dynamics protein crystallography room temperature

Journal

Acta crystallographica. Section D, Structural biology
ISSN: 2059-7983
Titre abrégé: Acta Crystallogr D Struct Biol
Pays: United States
ID NLM: 101676043

Informations de publication

Date de publication:
01 Aug 2022
Historique:
received: 06 04 2022
accepted: 08 07 2022
entrez: 2 8 2022
pubmed: 3 8 2022
medline: 4 8 2022
Statut: ppublish

Résumé

Fixed-target serial crystallography allows the high-throughput collection of diffraction data from small crystals at room temperature. This methodology is particularly useful for difficult samples that have sensitivity to radiation damage or intolerance to cryoprotection measures; fixed-target methods also have the added benefit of low sample consumption. Here, this method is applied to the structure determination of the circadian photoreceptor cryptochrome (CRY), previous structures of which have been determined at cryogenic temperature. In determining the structure, several data-filtering strategies were tested for combining observations from the hundreds of crystals that contributed to the final data set. Removing data sets based on the average correlation coefficient among equivalent reflection intensities between a given data set and all others was most effective at improving the data quality and maintaining overall completeness. CRYs are light sensors that undergo conformational photoactivation. Comparisons between the cryogenic and room-temperature CRY structures reveal regions of enhanced mobility at room temperature in loops that have functional importance within the CRY family of proteins. The B factors of the room-temperature structure correlate well with those predicted from molecular-dynamics simulations.

Identifiants

pubmed: 35916222
pii: S2059798322007008
doi: 10.1107/S2059798322007008
pmc: PMC9344480
doi:

Substances chimiques

Cryptochromes 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

975-985

Subventions

Organisme : NIGMS NIH HHS
ID : P30 GM124166
Pays : United States
Organisme : NIGMS NIH HHS
ID : R35 GM122535
Pays : United States
Organisme : NIH HHS
ID : R35122535
Pays : United States

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Auteurs

Connor M Schneps (CM)

Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY 14850, USA.

Abir Ganguly (A)

Institute for Quantitative Biomedicine, Rutgers University, Piscataway, NJ 08854, USA.

Brian R Crane (BR)

Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY 14850, USA.

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Classifications MeSH