Key difference between transition state stabilization and ground state destabilization: increasing atomic charge densities before or during enzyme-substrate binding.


Journal

Chemical science
ISSN: 2041-6520
Titre abrégé: Chem Sci
Pays: England
ID NLM: 101545951

Informations de publication

Date de publication:
13 Jul 2022
Historique:
received: 07 04 2022
accepted: 20 06 2022
entrez: 3 8 2022
pubmed: 4 8 2022
medline: 4 8 2022
Statut: epublish

Résumé

The origin of the enormous catalytic power of enzymes has been extensively studied through experimental and computational approaches. Although precise mechanisms are still subject to much debate, enzymes are thought to catalyze reactions by stabilizing transition states (TSs) or destabilizing ground states (GSs). By exploring the catalysis of various types of enzyme-substrate noncovalent interactions, we found that catalysis by TS stabilization and the catalysis by GS destabilization share common features by reducing the free energy barriers (Δ

Identifiants

pubmed: 35919436
doi: 10.1039/d2sc01994a
pii: d2sc01994a
pmc: PMC9278421
doi:

Types de publication

Journal Article

Langues

eng

Pagination

8193-8202

Subventions

Organisme : NIAID NIH HHS
ID : U01 AI124290
Pays : United States

Informations de copyright

This journal is © The Royal Society of Chemistry.

Déclaration de conflit d'intérêts

The authors declare no competing financial interests.

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Auteurs

Deliang Chen (D)

Jiangxi Key Laboratory of Organo-Pharmaceutical Chemistry, Chemistry and Chemical Engineering College, Gannan Normal University Ganzhou Jiangxi 341000 China deliang2211@hotmail.com.

Yibao Li (Y)

Jiangxi Key Laboratory of Organo-Pharmaceutical Chemistry, Chemistry and Chemical Engineering College, Gannan Normal University Ganzhou Jiangxi 341000 China deliang2211@hotmail.com.

Xun Li (X)

Jiangxi Key Laboratory of Organo-Pharmaceutical Chemistry, Chemistry and Chemical Engineering College, Gannan Normal University Ganzhou Jiangxi 341000 China deliang2211@hotmail.com.

Xuechuan Hong (X)

State Key Laboratory of Virology, Key Laboratory of Combinatorial Biosynthesis and Drug Discovery and Hubei Province, Wuhan University School of Pharmaceutical Sciences Wuhan 430071 China.

Xiaolin Fan (X)

Jiangxi Key Laboratory of Organo-Pharmaceutical Chemistry, Chemistry and Chemical Engineering College, Gannan Normal University Ganzhou Jiangxi 341000 China deliang2211@hotmail.com.

Tor Savidge (T)

Department of Pathology & Immunology, Baylor College of Medicine Houston TX 77030 USA tor.savidge@bcm.edu.
Texas Children's Microbiome Center, Texas Childrens Hospital Houston TX 77030 USA.

Classifications MeSH