Recent progress in analyzing the spatial structure of the human microbiome: distinguishing biogeography and architecture in the oral and gut communities.
Journal
Current opinion in endocrine and metabolic research
ISSN: 2451-9650
Titre abrégé: Curr Opin Endocr Metab Res
Pays: England
ID NLM: 101722894
Informations de publication
Date de publication:
Jun 2021
Jun 2021
Historique:
entrez:
8
8
2022
pubmed:
1
6
2021
medline:
1
6
2021
Statut:
ppublish
Résumé
Fueled by technological advances in methods for sample collection and preservation in sequencing studies, and in advances in computational analyses of high content image data, the spatial structure of the human microbiome is coming to light. In this mini-review, we summarize recent developments in our understanding of the structure of two human microbiomes: the lower gut and the oral cavity. We focus on only the most recent literature and we make an important distinction between two forms of spatial structure, governed by scale: biogeography and architecture. By segmenting the study of microbiome spatial structure into two categories, we demonstrate the potential to greatly advance our understanding of the mechanistic principles that link structure and function in the microbiome.
Identifiants
pubmed: 35936977
doi: 10.1016/j.coemr.2021.04.005
pmc: PMC9351436
mid: NIHMS1825173
doi:
Types de publication
Journal Article
Langues
eng
Pagination
275-283Subventions
Organisme : NIDCR NIH HHS
ID : R03 DE028042
Pays : United States
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