Multicolor plate reader fluorescence calibration.

calibration cell count fluorescence units

Journal

Synthetic biology (Oxford, England)
ISSN: 2397-7000
Titre abrégé: Synth Biol (Oxf)
Pays: England
ID NLM: 101728857

Informations de publication

Date de publication:
2022
Historique:
received: 15 12 2021
revised: 15 06 2022
accepted: 20 07 2022
entrez: 11 8 2022
pubmed: 12 8 2022
medline: 12 8 2022
Statut: epublish

Résumé

Plate readers are commonly used to measure cell growth and fluorescence, yet the utility and reproducibility of plate reader data is limited by the fact that it is typically reported in arbitrary or relative units. We have previously established a robust serial dilution protocol for calibration of plate reader measurements of absorbance to estimated bacterial cell count and for green fluorescence from proteins expressed in bacterial cells to molecules of equivalent fluorescein. We now extend these protocols to calibration of red fluorescence to the sulforhodamine-101 fluorescent dye and blue fluorescence to Cascade Blue. Evaluating calibration efficacy via an interlaboratory study, we find that these calibrants do indeed provide comparable precision to the prior calibrants and that they enable effective cross-laboratory comparison of measurements of red and blue fluorescence from proteins expressed in bacterial cells.

Identifiants

pubmed: 35949424
doi: 10.1093/synbio/ysac010
pii: ysac010
pmc: PMC9357555
doi:

Types de publication

Journal Article

Langues

eng

Pagination

ysac010

Informations de copyright

© The Author(s) 2022. Published by Oxford University Press.

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Auteurs

Jacob Beal (J)

Intelligent Software and Systems, Raytheon BBN Technologies, 10 Moulton Street, Cambridge 02138, MA, USA.

Cheryl A Telmer (CA)

Department of Biological Sciences, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh 15213, PA, USA.

Alejandro Vignoni (A)

Synthetic Biology and Biosystems Control Group, Instituto de Automatica e Informatica Industrial, Universitat Politecnica de Valencia, Camino de Vera s/n, Valencia 46022, Spain.

Yadira Boada (Y)

Synthetic Biology and Biosystems Control Group, Instituto de Automatica e Informatica Industrial, Universitat Politecnica de Valencia, Camino de Vera s/n, Valencia 46022, Spain.

Geoff S Baldwin (GS)

Department of Life Sciences, Imperial College London, South Kensington Campus, Exhibition Road, London SW7 2AZ, UK.

Liam Hallett (L)

Department of Life Sciences, Imperial College London, South Kensington Campus, Exhibition Road, London SW7 2AZ, UK.

Taeyang Lee (T)

Department of Life Sciences, Imperial College London, South Kensington Campus, Exhibition Road, London SW7 2AZ, UK.

Vinoo Selvarajah (V)

iGEM Foundation, 45 Prospect Street, Cambridge 02139, MA, USA.

Sonja Billerbeck (S)

Molecular Microbiology, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Nijenborgh 7, Groningen 9747 AG, The Netherlands.

Bradley Brown (B)

School of Engineering, Newcastle University, Devonshire Building, Devonshire Terrace, NE1 7RU Newcastle Upon Tyne, UK.

Guo-Nan Cai (GN)

School of Life Sciences, Fudan University, 220 Handan Road, Shanghai 200433, China.

Liang Cai (L)

School of Life Sciences, Fudan University, 220 Handan Road, Shanghai 200433, China.

Edward Eisenstein (E)

Institute of Bioscience and Biotechnology Research, Fischell Department of Bioengineering, University of Maryland, 9600 Gudelsky Drive, Rockville 20850, MD, USA.

Daisuke Kiga (D)

School of Advanced Science and Engineering, Waseda University, 2-2 Wakamatsu Cho, Totsukamachi, Shinjuku City 169-8050, Tokyo, Japan.

David Ross (D)

Material Measurement Laboratory, National Institute of Standards and Technology, 100 Bureau Dr., Gaithersburg 20899, MD, USA.

Nina Alperovich (N)

Material Measurement Laboratory, National Institute of Standards and Technology, 100 Bureau Dr., Gaithersburg 20899, MD, USA.

Noah Sprent (N)

Department of Chemical Engineering, Imperial College London, South Kensington Campus, Exhibition Road, London SW7 2AZ, UK.

Jaclyn Thompson (J)

Chemical Engineering, Worcester Polytechnic Institute, 100 Institute Road, Worcester 01609-2280, MA, USA.

Eric M Young (EM)

Chemical Engineering, Worcester Polytechnic Institute, 100 Institute Road, Worcester 01609-2280, MA, USA.

Drew Endy (D)

Bioengineering, Stanford University, 443 Via Ortega, Stanford 94305, CA, USA.

Traci Haddock-Angelli (T)

iGEM Foundation, 45 Prospect Street, Cambridge 02139, MA, USA.

Classifications MeSH