Metabolomics Profiling of Pituitary Adenomas by Raman Spectroscopy, Attenuated Total Reflection-Fourier Transform Infrared Spectroscopy, and Mass Spectrometry of Serum Samples.


Journal

Analytical chemistry
ISSN: 1520-6882
Titre abrégé: Anal Chem
Pays: United States
ID NLM: 0370536

Informations de publication

Date de publication:
30 08 2022
Historique:
pubmed: 19 8 2022
medline: 1 9 2022
entrez: 18 8 2022
Statut: ppublish

Résumé

To date, no studies are available in which pituitary adenomas (PAs) have been studied using techniques like confocal Raman spectroscopy, attenuated total reflection-Fourier transform infrared (FT-IR), and liquid chromatography-tandem mass spectrometry (LC-MS/MS) in the same serum samples. To understand the metabolomics fingerprint, Raman spectra of 16 acromegaly, 19 Cushing's, and 33 nonfunctional PA (NFPA) and ATR-FTIR spectral acquisition of 16 acromegaly, 18 Cushing's, and 22 NFPA patient's serum samples were acquired. Next, Principal component-based linear discriminant analysis (PC-LDA) models were developed, Raman spectral analysis classified acromegaly with an accuracy of 79.17%, sensitivity of 75%, and specificity of 81.25%, Cushing's with an accuracy of 66.67%, sensitivity of 100%, and specificity of 52.63%, and NFPA with an accuracy of 73.17%, sensitivity of 75%, and specificity of 72.73%. ATR-FTIR spectral analysis classified acromegaly with an accuracy of 95.83%, sensitivity of 100%, and specificity of 93.75%, Cushing's with an accuracy of 65.38%, sensitivity of 87.5%, and specificity of 55.56%, and NFPA with an accuracy of 70%, sensitivity of 87.5%, and specificity of 43.75%. In either of the cases, healthy individual cohorts were clearly segregated from the disease cohort, which identified differential regulated regions of nucleic acids, lipids, amides, phosphates, and polysaccharide/C-C residue α helix regions. Furthermore, LC-MS/MS-based analysis of sera samples resulted in the identification of various sphingosine, lipids, acylcarnitines, amino acids, ethanolamine, choline, and their derivatives that differentially regulated in each tumor cohort. We believe cues obtained from the study may be used to generate the metabolite-based test to diagnose PAs from serum in addition to conventional techniques and also to understand disease biology for better disease management, point of care, and improving quality of life in PA patients.

Identifiants

pubmed: 35980087
doi: 10.1021/acs.analchem.2c02487
doi:

Substances chimiques

Lipids 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

11898-11907

Auteurs

Arghya Banerjee (A)

Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India.

Ankit Halder (A)

Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India.

Priyanka Jadhav (P)

Advanced Centre for Treatment Research and Education in Cancer (ACTREC), Tata Memorial Centre (TMC). Sector-22, Kharghar, Navi Mumbai 410210, India.

Renuka Bankar (R)

Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India.

Janhavi Pattarkine (J)

Department of Biotechnology, Dr. D.Y. Patil Arts, Commerce and Science College, Pimpri, Pune 411018, India.

Arti Hole (A)

Advanced Centre for Treatment Research and Education in Cancer (ACTREC), Tata Memorial Centre (TMC). Sector-22, Kharghar, Navi Mumbai 410210, India.

Abhidha Shah (A)

Department of Neurosurgery, King Edward Memorial Hospital and Seth G. S. Medical College, Dr E Borges Road, Acharya Donde Marg, Parel, Opposite Tata & Wadia Hospital, Mumbai 400012, India.

Atul Goel (A)

Department of Neurosurgery, King Edward Memorial Hospital and Seth G. S. Medical College, Dr E Borges Road, Acharya Donde Marg, Parel, Opposite Tata & Wadia Hospital, Mumbai 400012, India.

C Murali Krishna (C)

Advanced Centre for Treatment Research and Education in Cancer (ACTREC), Tata Memorial Centre (TMC). Sector-22, Kharghar, Navi Mumbai 410210, India.

Sanjeeva Srivastava (S)

Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India.

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