An artificial intelligence model predicts the survival of solid tumour patients from imaging and clinical data.


Journal

European journal of cancer (Oxford, England : 1990)
ISSN: 1879-0852
Titre abrégé: Eur J Cancer
Pays: England
ID NLM: 9005373

Informations de publication

Date de publication:
10 2022
Historique:
received: 24 05 2022
revised: 27 06 2022
accepted: 28 06 2022
pubmed: 20 8 2022
medline: 21 9 2022
entrez: 19 8 2022
Statut: ppublish

Résumé

The need for developing new biomarkers is increasing with the emergence of many targeted therapies. Artificial Intelligence (AI) algorithms have shown great promise in the medical imaging field to build predictive models. We developed a prognostic model for solid tumour patients using AI on multimodal data. Our retrospective study included examinations of patients with seven different cancer types performed between 2003 and 2017 in 17 different hospitals. Radiologists annotated all metastases on baseline computed tomography (CT) and ultrasound (US) images. Imaging features were extracted using AI models and used along with the patients' and treatments' metadata. A Cox regression was fitted to predict prognosis. Performance was assessed on a left-out test set with 1000 bootstraps. The model was built on 436 patients and tested on 196 patients (mean age 59, IQR: 51-6, 411 men out of 616 patients). On the whole, 1147 US images were annotated with lesions delineation, and 632 thorax-abdomen-pelvis CTs (total of 301,975 slices) were fully annotated with a total of 9516 lesions. The developed model reaches an average concordance index of 0.71 (0.67-0.76, 95% CI). Using the median predicted risk as a threshold value, the model is able to significantly (log-rank test P value < 0.001) isolate high-risk patients from low-risk patients (respective median OS of 11 and 31 months) with a hazard ratio of 3.5 (2.4-5.2, 95% CI). AI was able to extract prognostic features from imaging data, and along with clinical data, allows an accurate stratification of patients' prognoses.

Sections du résumé

BACKGROUND
The need for developing new biomarkers is increasing with the emergence of many targeted therapies. Artificial Intelligence (AI) algorithms have shown great promise in the medical imaging field to build predictive models. We developed a prognostic model for solid tumour patients using AI on multimodal data.
PATIENTS AND METHODS
Our retrospective study included examinations of patients with seven different cancer types performed between 2003 and 2017 in 17 different hospitals. Radiologists annotated all metastases on baseline computed tomography (CT) and ultrasound (US) images. Imaging features were extracted using AI models and used along with the patients' and treatments' metadata. A Cox regression was fitted to predict prognosis. Performance was assessed on a left-out test set with 1000 bootstraps.
RESULTS
The model was built on 436 patients and tested on 196 patients (mean age 59, IQR: 51-6, 411 men out of 616 patients). On the whole, 1147 US images were annotated with lesions delineation, and 632 thorax-abdomen-pelvis CTs (total of 301,975 slices) were fully annotated with a total of 9516 lesions. The developed model reaches an average concordance index of 0.71 (0.67-0.76, 95% CI). Using the median predicted risk as a threshold value, the model is able to significantly (log-rank test P value < 0.001) isolate high-risk patients from low-risk patients (respective median OS of 11 and 31 months) with a hazard ratio of 3.5 (2.4-5.2, 95% CI).
CONCLUSION
AI was able to extract prognostic features from imaging data, and along with clinical data, allows an accurate stratification of patients' prognoses.

Identifiants

pubmed: 35985252
pii: S0959-8049(22)00407-5
doi: 10.1016/j.ejca.2022.06.055
pii:
doi:

Substances chimiques

Biomarkers 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

90-98

Informations de copyright

Copyright © 2022 The Author(s). Published by Elsevier Ltd.. All rights reserved.

Auteurs

Kathryn Schutte (K)

Owkin Lab, Owkin, Inc., 10003, New York, NY, USA. Electronic address: kathryn.schutte@owkin.com.

Fabien Brulport (F)

Owkin Lab, Owkin, Inc., 10003, New York, NY, USA.

Sana Harguem-Zayani (S)

Department of Imaging, Gustave Roussy, Université Paris Saclay, 94805, Villejuif, France.

Jean-Baptiste Schiratti (JB)

Owkin Lab, Owkin, Inc., 10003, New York, NY, USA.

Ridouane Ghermi (R)

Owkin Lab, Owkin, Inc., 10003, New York, NY, USA.

Paul Jehanno (P)

Owkin Lab, Owkin, Inc., 10003, New York, NY, USA.

Alexandre Jaeger (A)

Owkin Lab, Owkin, Inc., 10003, New York, NY, USA; Calypse Consulting, 75002, Paris, France.

Talal Alamri (T)

Department of Imaging, Gustave Roussy, Université Paris Saclay, 94805, Villejuif, France.

Raphaël Naccache (R)

Department of Imaging, Gustave Roussy, Université Paris Saclay, 94805, Villejuif, France.

Leila Haddag-Miliani (L)

Department of Imaging, Gustave Roussy, Université Paris Saclay, 94805, Villejuif, France.

Teresa Orsi (T)

Department of Imaging, Gustave Roussy, Université Paris Saclay, 94805, Villejuif, France.

Jean-Philippe Lamarque (JP)

Direction of Digital Transformation & Information Systems, Gustave Roussy, Université Paris-Saclay, 94805, Villejuif, France.

Isaline Hoferer (I)

Department of Imaging, Gustave Roussy, Université Paris Saclay, 94805, Villejuif, France; Biomaps, UMR1281 INSERM, CEA, CNRS, Université Paris-Saclay, 94805, Villejuif, France.

Littisha Lawrance (L)

Department of Imaging, Gustave Roussy, Université Paris Saclay, 94805, Villejuif, France; Biomaps, UMR1281 INSERM, CEA, CNRS, Université Paris-Saclay, 94805, Villejuif, France.

Baya Benatsou (B)

Department of Imaging, Gustave Roussy, Université Paris Saclay, 94805, Villejuif, France; Biomaps, UMR1281 INSERM, CEA, CNRS, Université Paris-Saclay, 94805, Villejuif, France.

Imad Bousaid (I)

Direction of Digital Transformation & Information Systems, Gustave Roussy, Université Paris-Saclay, 94805, Villejuif, France.

Mikael Azoulay (M)

Direction of Digital Transformation & Information Systems, Gustave Roussy, Université Paris-Saclay, 94805, Villejuif, France.

Antoine Verdon (A)

Direction of Digital Transformation & Information Systems, Gustave Roussy, Université Paris-Saclay, 94805, Villejuif, France.

François Bidault (F)

Department of Imaging, Gustave Roussy, Université Paris Saclay, 94805, Villejuif, France; Biomaps, UMR1281 INSERM, CEA, CNRS, Université Paris-Saclay, 94805, Villejuif, France.

Corinne Balleyguier (C)

Department of Imaging, Gustave Roussy, Université Paris Saclay, 94805, Villejuif, France; Biomaps, UMR1281 INSERM, CEA, CNRS, Université Paris-Saclay, 94805, Villejuif, France.

Victor Aubert (V)

Owkin Lab, Owkin, Inc., 10003, New York, NY, USA.

Etienne Bendjebbar (E)

Owkin Lab, Owkin, Inc., 10003, New York, NY, USA.

Charles Maussion (C)

Owkin Lab, Owkin, Inc., 10003, New York, NY, USA.

Nicolas Loiseau (N)

Owkin Lab, Owkin, Inc., 10003, New York, NY, USA.

Benoît Schmauch (B)

Owkin Lab, Owkin, Inc., 10003, New York, NY, USA.

Meriem Sefta (M)

Owkin Lab, Owkin, Inc., 10003, New York, NY, USA.

Gilles Wainrib (G)

Owkin Lab, Owkin, Inc., 10003, New York, NY, USA.

Thomas Clozel (T)

Owkin Lab, Owkin, Inc., 10003, New York, NY, USA.

Samy Ammari (S)

Department of Imaging, Gustave Roussy, Université Paris Saclay, 94805, Villejuif, France; Biomaps, UMR1281 INSERM, CEA, CNRS, Université Paris-Saclay, 94805, Villejuif, France.

Nathalie Lassau (N)

Department of Imaging, Gustave Roussy, Université Paris Saclay, 94805, Villejuif, France; Biomaps, UMR1281 INSERM, CEA, CNRS, Université Paris-Saclay, 94805, Villejuif, France.

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