Regularized regression on compositional trees with application to MRI analysis.

composition hierarchical tree regularized regression

Journal

Journal of the Royal Statistical Society. Series C, Applied statistics
ISSN: 0035-9254
Titre abrégé: J R Stat Soc Ser C Appl Stat
Pays: England
ID NLM: 101086541

Informations de publication

Date de publication:
Jun 2022
Historique:
entrez: 22 8 2022
pubmed: 23 8 2022
medline: 23 8 2022
Statut: ppublish

Résumé

A compositional tree refers to a tree structure on a set of random variables where each random variable is a node and composition occurs at each non-leaf node of the tree. As a generalization of compositional data, compositional trees handle more complex relationships among random variables and appear in many disciplines, such as brain imaging, genomics and finance. We consider the problem of sparse regression on data that are associated with a compositional tree and propose a transformation-free tree-based regularized regression method for component selection. The regularization penalty is designed based on the tree structure and encourages a sparse tree representation. We prove that our proposed estimator for regression coefficients is both consistent and model selection consistent. In the simulation study, our method shows higher accuracy than competing methods under different scenarios. By analyzing a brain imaging data set from studies of Alzheimer's disease, our method identifies meaningful associations between memory decline and volume of brain regions that are consistent with current understanding.

Identifiants

pubmed: 35991528
doi: 10.1111/rssc.12545
pmc: PMC9387759
mid: NIHMS1770806
doi:

Types de publication

Journal Article

Langues

eng

Pagination

541-561

Subventions

Organisme : NIA NIH HHS
ID : P30 AG066507
Pays : United States
Organisme : NIBIB NIH HHS
ID : P41 EB031771
Pays : United States
Organisme : NIBIB NIH HHS
ID : R01 EB029977
Pays : United States

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Auteurs

Bingkai Wang (B)

Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health.

Brian S Caffo (BS)

Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health.

Xi Luo (X)

Department of Biostatistics and Data Science, The University of Texas Health Science Center at Houston.

Chin-Fu Liu (CF)

Center for Imaging Science, Biomedical Engineering, Johns Hopkins University.

Andreia V Faria (AV)

Department of Radiology, Johns Hopkins University School of Medicine.

Michael I Miller (MI)

Center for Imaging Science, Biomedical Engineering, Johns Hopkins University.

Yi Zhao (Y)

Department of Biostatistics, Indiana University School of Medicine.

Classifications MeSH