Isogenic Japonica Rice Koshihikari Integrated with Late Flowering Gene
Hd16
WGS
co-integration
isogenic Koshihikari
late flowering gene
new green evolution
rice
sd1
semidwarf gene
Journal
Life (Basel, Switzerland)
ISSN: 2075-1729
Titre abrégé: Life (Basel)
Pays: Switzerland
ID NLM: 101580444
Informations de publication
Date de publication:
15 Aug 2022
15 Aug 2022
Historique:
received:
12
07
2022
revised:
28
07
2022
accepted:
29
07
2022
entrez:
26
8
2022
pubmed:
27
8
2022
medline:
27
8
2022
Statut:
epublish
Résumé
We developed semidwarf and late-maturing isogenics of Koshihikari to stabilize high yield and avoid high temperature maturation. Whole-genome analysis (WGS) was conducted to examine the transitional changes in the entire genome, the size of DNA fragments integrated with the target gene, and genes accompanying the target gene owing to the progress of backcrossing. In both Koshihikari Hd16 (BC
Identifiants
pubmed: 36013416
pii: life12081237
doi: 10.3390/life12081237
pmc: PMC9409911
pii:
doi:
Types de publication
Journal Article
Langues
eng
Subventions
Organisme : Japan Science and Technology Agency
ID : 21482194
Références
Bioinformatics. 2009 Jul 15;25(14):1754-60
pubmed: 19451168
Plant Physiol. 2010 Aug;153(4):1747-58
pubmed: 20566706
Theor Appl Genet. 1994 Sep;89(1):54-9
pubmed: 24177769
Bioinformatics. 2014 Aug 1;30(15):2114-20
pubmed: 24695404
Genome. 1999 Aug;42(4):646-55
pubmed: 10464789
Theor Appl Genet. 1994 Sep;89(1):49-53
pubmed: 24177768
Front Plant Sci. 2014 May 13;5:193
pubmed: 24860584
Int J Genomics. 2022 Jan 6;2022:4565977
pubmed: 35036423
Plant J. 2013 Oct;76(1):36-46
pubmed: 23789941
Theor Appl Genet. 2011 Nov;123(7):1133-43
pubmed: 21789706
Biomed Res Int. 2018 Apr 3;2018:4241725
pubmed: 29850513
Nature. 2002 Apr 18;416(6882):701-2
pubmed: 11961544
DNA Res. 2002 Feb 28;9(1):11-7
pubmed: 11939564
Trends Genet. 2003 Jan;19(1):5-9
pubmed: 12493241
Genome Res. 2010 Sep;20(9):1297-303
pubmed: 20644199
Genes Genet Syst. 2000 Oct;75(5):245-9
pubmed: 11245217
Proc Natl Acad Sci U S A. 2002 Jun 25;99(13):9043-8
pubmed: 12077303
Bioinformatics. 2009 Aug 15;25(16):2078-9
pubmed: 19505943
Funct Plant Biol. 2002 Aug;29(9):1121-1124
pubmed: 32689564
Nat Biotechnol. 2003 Aug;21(8):873-4
pubmed: 12894201
Plant Physiol. 2007 May;144(1):258-77
pubmed: 17384160