Quantifying Fundamental Vegetation Traits over Europe Using the Sentinel-3 OLCI Catalogue in Google Earth Engine.
Gaussian process regression
Google Earth Engine
OLCI
Sentinel-3
TOA radiance
hybrid method
machine learning
time series
vegetation traits
Journal
Remote sensing
ISSN: 2072-4292
Titre abrégé: Remote Sens (Basel)
Pays: Switzerland
ID NLM: 101624426
Informations de publication
Date de publication:
10 Mar 2022
10 Mar 2022
Historique:
entrez:
26
8
2022
pubmed:
27
8
2022
medline:
27
8
2022
Statut:
ppublish
Résumé
Thanks to the emergence of cloud-computing platforms and the ability of machine learning methods to solve prediction problems efficiently, this work presents a workflow to automate spatiotemporal mapping of essential vegetation traits from Sentinel-3 (S3) imagery. The traits included leaf chlorophyll content (LCC), leaf area index (LAI), fraction of absorbed photosynthetically active radiation (FAPAR), and fractional vegetation cover (FVC), being fundamental for assessing photosynthetic activity on Earth. The workflow involved Gaussian process regression (GPR) algorithms trained on top-of-atmosphere (TOA) radiance simulations generated by the coupled canopy radiative transfer model (RTM) SCOPE and the atmospheric RTM 6SV. The retrieval models, named to S3-TOA-GPR-1.0, were directly implemented in Google Earth Engine (GEE) to enable the quantification of the traits from TOA data as acquired from the S3 Ocean and Land Colour Instrument (OLCI) sensor.Following good to high theoretical validation results with normalized root mean square error (NRMSE) ranging from 5% (FAPAR) to 19% (LAI), a three fold evaluation approach over diverse sites and land cover types was pursued: (1) temporal comparison against LAI and FAPAR products obtained from Moderate Resolution Imaging Spectroradiometer (MODIS) for the time window 2016-2020, (2) spatial difference mapping with Copernicus Global Land Service (CGLS) estimates, and (3) direct validation using interpolated in situ data from the VALERI network. For all three approaches, promising results were achieved. Selected sites demonstrated coherent seasonal patterns compared to LAI and FAPAR MODIS products, with differences between spatially averaged temporal patterns of only 6.59%. In respect of the spatial mapping comparison, estimates provided by the S3-TOA-GPR-1.0 models indicated highest consistency with FVC and FAPAR CGLS products. Moreover, the direct validation of our S3-TOA-GPR-1.0 models against VALERI estimates indicated with regard to jurisdictional claims in good retrieval performance for LAI, FAPAR and FVC. We conclude that our retrieval workflow of spatiotemporal S3 TOA data processing into GEE opens the path towards global monitoring of fundamental vegetation traits, accessible to the whole research community.
Identifiants
pubmed: 36016907
doi: 10.3390/rs14061347
pmc: PMC7613398
mid: EMS152682
doi:
Types de publication
Journal Article
Langues
eng
Pagination
1347Subventions
Organisme : European Research Council
ID : 755617
Pays : International
Déclaration de conflit d'intérêts
Conflicts of Interest: The authors declare no conflict of interest.
Références
Science. 2013 Nov 15;342(6160):850-3
pubmed: 24233722
Remote Sens Environ. 2019 Feb;221:508-521
pubmed: 30774156
Commun Biol. 2021 Apr 12;4(1):462
pubmed: 33846550
J Geophys Res Biogeosci. 2014 Dec;119(12):2312-2327
pubmed: 27398266
Sensors (Basel). 2008 Mar 28;8(4):2136-2160
pubmed: 27879814
J Evol Biol. 2009 Aug;22(8):1563-85
pubmed: 19538344
Remote Sens Environ. 2019 Sep 15;231:
pubmed: 33414568
J Plant Physiol. 2003 Mar;160(3):271-82
pubmed: 12749084
Environ Monit Assess. 2016 Dec;188(12):654
pubmed: 27826819
Ecol Process. 2021;10(1):1
pubmed: 33425642
Biol Lett. 2018 May;14(5):
pubmed: 29769297